(Q37707236)

22 August 2017

Next-generation survey sequencing and the molecular organization of wheat chromosome 6B. (English)

1 reference

22 August 2017

1 reference

12

Jaroslav Doležel

0 references

Tsuyoshi Tanaka

object named as

Tsuyoshi Tanaka

1

0 references

Hirokazu Handa

object named as

Hirokazu Handa

16

0 references

Takeshi Itoh

object named as

Takeshi Itoh

14

0 references

author name string

Fuminori Kobayashi

2

1 reference

22 August 2017

Giri Prasad Joshi

3

1 reference

22 August 2017

Ritsuko Onuki

4

1 reference

22 August 2017

Hiroaki Sakai

5

1 reference

22 August 2017

Hiroyuki Kanamori

6

1 reference

22 August 2017

Jianzhong Wu

7

1 reference

22 August 2017

Hana Simkova

8

1 reference

22 August 2017

Shuhei Nasuda

9

1 reference

22 August 2017

Takashi R Endo

10

1 reference

22 August 2017

Katsuyuki Hayakawa

11

1 reference

22 August 2017

Yasunari Ogihara

13

1 reference

22 August 2017

Takashi Matsumoto

15

1 reference

22 August 2017

1 October 2013

1 reference

22 August 2017

1 reference

22 August 2017

21

1 reference

22 August 2017

2

1 reference

22 August 2017

103-114

1 reference

Draft genome of the wheat A-genome progenitor Triticum urartu

22 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

MIPS PlantsDB: a database framework for comparative plant genome research

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Analysis of the bread wheat genome using whole-genome shotgun sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

A physical, genetic and functional sequence assembly of the barley genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Sorting the wheat from the chaff: identifying miRNAs in genomic survey sequences of Triticum aestivum chromosome 1AL.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

First survey of the wheat chromosome 5A composition through a next generation sequencing approach

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Functional features of a single chromosome arm in wheat (1AL) determined from its structure

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Evolution and functional diversification of MIRNA genes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

miRBase: integrating microRNA annotation and deep-sequencing data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Development of chromosome-specific BAC resources for genomics of bread wheat

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Genome sequencing and analysis of the model grass Brachypodium distachyon

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

A molecular-cytogenetic method for locating genes to pericentromeric regions facilitates a genomewide comparison of synteny between the centromeric regions of wheat and rice

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

The Sorghum bicolor genome and the diversification of grasses

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

The 'inner circle' of the cereal genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Identification and characterization of shared duplications between rice and wheat provide new insight into grass genome evolution

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

A unified classification system for eukaryotic transposable elements

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Chromosome-based genomics in the cereals

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

A NAC Gene regulating senescence improves grain protein, zinc, and iron content in wheat

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

A workshop report on wheat genome sequencing: International Genome Research on Wheat Consortium

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Analysis and sorting of rye (Secale cereale L.) chromosomes using flow cytometry.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Mfold web server for nucleic acid folding and hybridization prediction

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Accumulation of an acidic dehydrin in the vicinity of the plasma membrane during cold acclimation of wheat

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

TriFLDB: a database of clustered full-length coding sequences from Triticeae with applications to comparative grass genomics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

CENSOR--a program for identification and elimination of repetitive elements from DNA sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Structure and evolution of the intergenic region in a ribosomal DNA repeat unit of wheat

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Genome change in wheat observed through the structure and expression of α/β-gliadin genes

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Unlocking the barley genome by chromosomal and comparative genomics

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Gene content and virtual gene order of barley chromosome 1H.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

A kinase-START gene confers temperature-dependent resistance to wheat stripe rust

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Complex genome rearrangements reveal evolutionary dynamics of pericentromeric regions in the Triticeae

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3989483

Domestication evolution, genetics and genomics in wheat

1 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDNARES%2FDST041

Do Plants Have a One-Way Ticket to Genomic Obesity?

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDNARES%2FDST041

Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDNARES%2FDST041

Chromosome mapping of low-temperature induced Wcs120 family genes and regulation of cold-tolerance expression in wheat

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24086083

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Wheat VIN3-like PHD finger genes are up-regulated by vernalization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24086083

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence that miRNAs are different from other RNAs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24086083

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/DNARES/DST041

1 reference

22 August 2017

1 reference

22 August 2017

PubMed publication ID

24086083

1 reference