(Q37718241)

22 August 2017

Processed pseudogenes acquired somatically during cancer development (English)

1 reference

22 August 2017

18

Elli Papaemmanuil

1 reference

22 August 2017

21

Sarah O'Meara

0 references

Sancha Martin

33

Sancha Martin

1 reference

22 August 2017

29

Mel Greaves

1 reference

22 August 2017

Niccolo Bolli

13

0 references

Alex Boussioutas

Alex Boussioutas

36

0 references

Ultan McDermott

Ultan McDermott

42

0 references

David Bowtell

David Bowtell

32

0 references

David Malkin

28

David Malkin

0 references

Jack A. Taylor

Jack A Taylor

37

0 references

P. Andrew Futreal

40

P Andrew Futreal

1 reference

22 August 2017

35

Jorge S Reis-Filho

1 reference

22 August 2017

20

Keiran Raine

1 reference

22 August 2017

8

Andrew Menzies

1 reference

22 August 2017

17

Serena Nik-Zainal

1 reference

22 August 2017

23

Jon W Teague

1 reference

22 August 2017

41

Michael R Stratton

1 reference

Christine A Iacobuzio-Donahue

22 August 2017

25

Christine Iacobuzio-Donahue

1 reference

22 August 2017

5

Inigo Martincorena

1 reference

22 August 2017

3

John Marshall

1 reference

22 August 2017

12

Helen Davies

1 reference

22 August 2017

10

Manasa Ramakrishna

1 reference

22 August 2017

2

Adam Shlien

1 reference

22 August 2017

26

Thomas Santarius

1 reference

22 August 2017

Christodoulos P Pipinikas

4

Christodoulos P Pipinikas

1 reference

22 August 2017

16

Sam Behjati

1 reference

22 August 2017

Susanna L Cooke

1

1 reference

22 August 2017

Jose M C Tubio

6

1 reference

22 August 2017

Yilong Li

7

1 reference

22 August 2017

Laura Mudie

9

1 reference

22 August 2017

Lucy Yates

11

1 reference

22 August 2017

Graham R Bignell

14

1 reference

22 August 2017

Patrick S Tarpey

15

1 reference

22 August 2017

Vitor H Teixeira

19

1 reference

22 August 2017

Maryam S Dodoran

22

1 reference

22 August 2017

Adam P Butler

24

1 reference

22 August 2017

Richard G Grundy

27

1 reference

22 August 2017

Nikhil Munshi

30

1 reference

22 August 2017

Adrienne M Flanagan

31

1 reference

22 August 2017

Denis Larsimont

34

1 reference

22 August 2017

Neil D Hayes

38

1 reference

22 August 2017

Sam M Janes

39

1 reference

22 August 2017

Peter J Campbell

43

1 reference

22 August 2017

ICGC Breast Cancer Group

44

1 reference

22 August 2017

language of work or name

English

0 references

publication date

9 April 2014

1 reference

22 August 2017

Nature Communications

1 reference

22 August 2017

5

1 reference

22 August 2017

3644

1 reference

Creative Commons Attribution 3.0 Unported

22 August 2017

start time

9 April 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/ncomms4644

0 references

cites work

Inactivating CUX1 mutations promote tumorigenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Signatures of mutational processes in human cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Single-cell paired-end genome sequencing reveals structural variation per cell cycle

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Single-neuron sequencing analysis of L1 retrotransposition and somatic mutation in the human brain

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Extensive somatic L1 retrotransposition in colorectal tumors

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Comprehensive genomic characterization of squamous cell lung cancers

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Landscape of somatic retrotransposition in human cancers

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

The landscape of cancer genes and mutational processes in breast cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Mutational processes molding the genomes of 21 breast cancers

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

The life history of 21 breast cancers

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Somatic retrotransposition alters the genetic landscape of the human brain

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

3'UTR-mediated gene silencing of the Mixed Lineage Leukemia (MLL) gene

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Somatic SF3B1 mutation in myelodysplasia with ring sideroblasts

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Massive genomic rearrangement acquired in a single catastrophic event during cancer development

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

L1 retrotransposition in neurons is modulated by MeCP2.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

The patterns and dynamics of genomic instability in metastatic pancreatic cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Natural mutagenesis of human genomes by endogenous retrotransposons

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

A coding-independent function of gene and pseudogene mRNAs regulates tumour biology

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Fast and accurate long-read alignment with Burrows-Wheeler transform

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Complex landscapes of somatic rearrangement in human breast cancer genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

L1 retrotransposition in human neural progenitor cells

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Retrocopy contributions to the evolution of the human genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Evidence for the aldo-keto reductase pathway of polycyclic aromatic trans-dihydrodiol activation in human lung A549 cells

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

A strategy for predicting the chemosensitivity of human cancers and its application to drug discovery

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Statistical analysis of pathogenicity of somatic mutations in cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Human L1 element target-primed reverse transcription in vitro

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Molecular archeology of L1 insertions in the human genome.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Nature and structure of human genes that generate retropseudogenes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Human LINE retrotransposons generate processed pseudogenes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Mga, a dual-specificity transcription factor that interacts with Max and contains a T-domain DNA-binding motif

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Disruption of the APC gene by a retrotransposal insertion of L1 sequence in a colon cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

RAG-mediated recombination is the predominant driver of oncogenic rearrangement in ETV6-RUNX1 acute lymphoblastic leukemia

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Activation of polycyclic aromatic hydrocarbon trans-dihydrodiol proximate carcinogens by human aldo-keto reductase (AKR1C) enzymes and their functional overexpression in human lung carcinoma (A549) cells

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

Smoking and cancer-related gene expression in bronchial epithelium and non-small-cell lung cancers.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

DNA repair mediated by endonuclease-independent LINE-1 retrotransposition.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3996531

High-resolution genomic profiling of chronic lymphocytic leukemia reveals new recurrent genomic alterations

1 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS4644

Distributions of exons and introns in the human genome

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24714652

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS4644

1 reference

22 August 2017

0 references

1 reference

22 August 2017

PubMed publication ID

24714652

1 reference