(Q37786582)

23 August 2017

title

Regulating the regulators: modulators of transcription factor activity (English)

1 reference

23 August 2017

Regulating the Regulators: Modulators of Transcription Factor Activity (English)

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

post-translational protein modification

9 July 2024

main subject

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20827600

9 July 2024

author name string

Logan Everett

1

1 reference

23 August 2017

Matthew Hansen

2

1 reference

23 August 2017

Sridhar Hannenhalli

3

1 reference

23 August 2017

language of work or name

English

0 references

publication date

1 January 2010

1 reference

full work available at URL

23 August 2017

http://link.springer.com/content/pdf/10.1007/978-1-60761-854-6_19

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Methods in Molecular Biology

9 July 2024

published in

1 reference

23 August 2017

volume

674

1 reference

23 August 2017

page(s)

297-312

1 reference

Post-translational modifications influence transcription factor activity: a view from the ETS superfamily

23 August 2017

cites work

1

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Unimod: Protein modifications for mass spectrometry

9 July 2024

2

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

The RESID Database of Protein Modifications as a resource and annotation tool

9 July 2024

3

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Regulation of eukaryotic transcription factors by post-translational modification

9 July 2024

4

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

A 'molecular switchboard'--covalent modifications to proteins and their impact on transcription

9 July 2024

5

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Signal Transduction and the Control of Gene Expression

9 July 2024

6

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Regulating the regulators: lysine modifications make their mark

9 July 2024

7

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Multisite phosphorylation provides sophisticated regulation of transcription factors

9 July 2024

8

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Role of protein methylation in regulation of transcription

9 July 2024

9

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Acetylation of histones and transcription-related factors

9 July 2024

10

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Multisite protein modification and intramolecular signaling

9 July 2024

11

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Three habits of highly effective signaling pathways: principles of transcriptional control by developmental cell signaling

9 July 2024

12

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Transcriptional regulation by the phosphorylation-dependent factor CREB

9 July 2024

13

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

PTM-Switchboard--a database of posttranslational modifications of transcription factors, the mediating enzymes and target genes

9 July 2024

14

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

KEGG: kyoto encyclopedia of genes and genomes

9 July 2024

15

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Science's signal transduction knowledge environment: the connections maps database

9 July 2024

16

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

TRANSPATH--a high quality database focused on signal transduction

9 July 2024

17

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

The Saccharomyces cerevisiae Sko1p transcription factor mediates HOG pathway-dependent osmotic regulation of a set of genes encoding enzymes implicated in protection from oxidative damage

9 July 2024

18

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

9 July 2024

19

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Gene Ontology annotations at SGD: new data sources and annotation methods

9 July 2024

20

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

An online literature mining tool for protein phosphorylation

9 July 2024

21

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Extraction of regulatory gene/protein networks from Medline

9 July 2024

22

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Genome-wide location analysis of the stress-activated MAP kinase Hog1 in yeast.

9 July 2024

23

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Activated signal transduction kinases frequently occupy target genes

9 July 2024

24

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Repression of yeast Ste12 transcription factor by direct binding of unphosphorylated Kss1 MAPK and its regulation by the Ste7 MEK

9 July 2024

25

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Mimosa: mixture model of co-expression to detect modulators of regulatory interaction

9 July 2024

26

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

NCBI GEO: archive for high-throughput functional genomic data

9 July 2024

27

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Functional modules by relating protein interaction networks and gene expression.

9 July 2024

28

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

A gene-coexpression network for global discovery of conserved genetic modules

9 July 2024

29

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

STRING 7--recent developments in the integration and prediction of protein interactions

9 July 2024

30

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Estimating genomic coexpression networks using first-order conditional independence

9 July 2024

31

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context

9 July 2024

32

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Reverse engineering of regulatory networks in human B cells

9 July 2024

33

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Pacific Symposium on Biocomputing

9 July 2024

34

2000

418

A.J. Butte

2000

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Estimating mutual information using B-spline functions--an improved similarity measure for analysing gene expression data

9 July 2024

35

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

9 July 2024

36

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

The mutual information: detecting and evaluating dependencies between variables.

9 July 2024

37

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Clustering of genes into regulons using integrated modeling-COGRIM.

9 July 2024

38

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

T-profiler: scoring the activity of predefined groups of genes using gene expression data

9 July 2024

39

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes

9 July 2024

40

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Inferring condition-specific transcription factor function from DNA binding and gene expression data.

9 July 2024

41

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Inferring condition-specific modulation of transcription factor activity in yeast through regulon-based analysis of genomewide expression

9 July 2024

42

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription

9 July 2024

43

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Inference of transcription modification in long-live yeast strains from their expression profiles

9 July 2024

44

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Detecting intergene correlation changes in microarray analysis: a new approach to gene selection

9 July 2024

45

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

A differential wiring analysis of expression data correctly identifies the gene containing the causal mutation.

9 July 2024

46

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Extracting three-way gene interactions from microarray data

9 July 2024

47

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Pacific Symposium on Biocomputing

9 July 2024

48

20

264

K. Wang

2009

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

'Race' and the human genome

9 July 2024

49

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Genome-wide coexpression dynamics: theory and application

9 July 2024

50

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Kinase peptide specificity: improved determination and relevance to protein phosphorylation

9 July 2024

51

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

SiteSeek: post-translational modification analysis using adaptive locality-effective kernel methods and new profiles

9 July 2024

52

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Structural analysis of the protein phosphatase 1 docking motif: molecular description of binding specificities identifies interacting proteins

9 July 2024

53

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

From promiscuity to precision: protein phosphatases get a makeover

9 July 2024

54

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

MeMo: a web tool for prediction of protein methylation modifications.

9 July 2024

55

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Prediction of Nepsilon-acetylation on internal lysines implemented in Bayesian Discriminant Method

9 July 2024

56

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Computational identification of protein methylation sites through bi-profile Bayes feature extraction

9 July 2024

57

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Analysis of posttranslational modifications of proteins by tandem mass spectrometry.

9 July 2024

58

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Systematic Discovery of In Vivo Phosphorylation Networks

9 July 2024

59

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Resolving the network of cell signaling pathways using the evolving yeast two-hybrid system

9 July 2024

60

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Global analysis of protein activities using proteome chips

9 July 2024

61

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Global analysis of protein phosphorylation in yeast

9 July 2024

62

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis

9 July 2024

63

1 reference

https://api.crossref.org/works/10.1007/978-1-60761-854-6_19

9 July 2024

Identifiers

1 reference

23 August 2017

1 reference