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21 January 2020

review article

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title

Tandem mass spectrometry strategies for phosphoproteome analysis (English)

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21 January 2020

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2

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21 January 2020

Paul Stemmer

5

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21 January 2020

Gavin E. Reid

6

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21 January 2020

author name string

Amanda M Palumbo

1

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21 January 2020

Christine L Kalcic

3

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21 January 2020

Marcos Dantus

4

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21 January 2020

publication date

3 February 2011

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Mass Spectrometry Reviews

21 January 2020

published in

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21 January 2020

volume

30

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21 January 2020

issue

4

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21 January 2020

page(s)

600-625

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Phosphopeptide analysis by matrix-assisted laser desorption time-of-flight mass spectrometry

21 January 2020

cites work

1 reference

A multidimensional electrospray MS-based approach to phosphopeptide mapping

21 January 2018

1 reference

Chemical derivatization of phosphoserine and phosphothreonine containing peptides to increase sensitivity for MALDI-based analysis and for selectivity of MS/MS analysis

21 January 2018

1 reference

Enhanced detection of phosphopeptides in matrix-assisted laser desorption/ionization mass spectrometry using ammonium salts

21 January 2018

1 reference

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

21 January 2018

1 reference

Immunoaffinity enrichments followed by mass spectrometric detection for studying global protein tyrosine phosphorylation.

21 January 2018

1 reference

Fragmentation of protonated peptide ions via interaction with metastable atoms

21 January 2018

1 reference

Fragmentation of phosphorylated and singly charged peptide ions via interaction with metastable atoms

21 January 2018

1 reference

Contributions of mass spectrometry to peptide and protein structure

21 January 2018

1 reference

Post-translational modification of p53 in tumorigenesis

21 January 2018

1 reference

Phosphopeptide fragmentation and analysis by mass spectrometry

21 January 2018

1 reference

Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry

21 January 2018

1 reference

Infrared multiphoton dissociation in quadrupole ion traps

21 January 2018

1 reference

Electron detachment dissociation of peptide di-anions: an electron–hole recombination phenomenon

21 January 2018

1 reference

Simultaneous collision induced dissociation of the charge reduced parent ion during electron capture dissociation

21 January 2018

1 reference

Mapping posttranslational modifications of proteins by MS-based selective detection: application to phosphoproteomics

21 January 2018

1 reference

Liquid chromatography-Fourier transform ion cyclotron resonance mass spectrometric characterization of protein kinase C phosphorylation

21 January 2018

1 reference

Protein kinase A phosphorylation characterized by tandem Fourier transform ion cyclotron resonance mass spectrometry.

21 January 2018

1 reference

Analysis of protein phosphorylation by hypothesis-driven multiple-stage mass spectrometry

21 January 2018

1 reference

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry

21 January 2018

1 reference

The regulation of protein function by multisite phosphorylation--a 25 year update

21 January 2018

1 reference

Proteomic analysis of in vivo phosphorylated synaptic proteins.

21 January 2018

1 reference

Metastable atom-activated dissociation mass spectrometry: leucine/isoleucine differentiation and ring cleavage of proline residues.

21 January 2018

1 reference

The role of electron capture dissociation in biomolecular analysis.

21 January 2018

1 reference

Monitoring protein kinase and phosphatase reactions with matrix-assisted laser desorption/ionization mass spectrometry and capillary zone electrophoresis: comparison of the detection efficiency of peptide-phosphopeptide mixtures.

21 January 2018

1 reference

Molecular insights into mechanisms of the cell death program: role in the progression of neurodegenerative disorders

21 January 2018

1 reference

Site-specific radical directed dissociation of peptides at phosphorylated residues

21 January 2018

1 reference

Electron capture dissociation in a digital ion trap mass spectrometer

21 January 2018

1 reference

Dual specificity protein phosphatases: therapeutic targets for cancer and Alzheimer's disease

21 January 2018

1 reference

Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenes

21 January 2018

1 reference

Phosphate group-driven fragmentation of multiply charged phosphopeptide anions. Improved recognition of peptides phosphorylated at serine, threonine, or tyrosine by negative ion electrospray tandem mass spectrometry

21 January 2018

1 reference

Gas-phase intramolecular phosphate shift in phosphotyrosine-containing peptide monoanions.

21 January 2018

1 reference

Infrared multiple photon dissociation spectroscopy of ions in Penning traps

21 January 2018

1 reference

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

21 January 2018

1 reference

Phosphoproteome analysis of capacitated human sperm. Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation

21 January 2018

1 reference

Selective, sensitive, and rapid phosphopeptide identification in enzymatic digests using ESI-FTICR-MS with infrared multiphoton dissociation

21 January 2018

1 reference

Gas-phase ion unimolecular dissociation for rapid phosphopeptide mapping by IRMPD in a Penning ion trap: an energetically favored process

21 January 2018

1 reference

Determination of the relative energies of activation for the dissociation of aromatic versus aliphatic phosphopeptides by ESI-FTICR-MS and IRMPD.

21 January 2018

1 reference

Synthesis of diazo functionalized solid supports and their application towards the enrichment of phosphorylated peptides.

21 January 2018

1 reference

Electron ionization dissociation of singly and multiply charged peptides

21 January 2018

1 reference

Phosphorylated serine and threonine residues promote site-specific fragmentation of singly charged, arginine-containing peptide ions

21 January 2018

1 reference

Hyperphosphorylation of microtubule-associated protein tau: a promising therapeutic target for Alzheimer disease

21 January 2018

1 reference

Dysregulation of protein phosphorylation/dephosphorylation in Alzheimer's disease: a therapeutic target

21 January 2018

1 reference

Performance characteristics of electron transfer dissociation mass spectrometry

21 January 2018

1 reference

Characterizing phosphoproteins and phosphoproteomes using mass spectrometry

21 January 2018

1 reference

Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analyses

21 January 2018

1 reference

Manipulating the fragmentation patterns of phosphopeptides via gas-phase boron derivatization: determining phosphorylation sites in peptides with multiple serines

21 January 2018

1 reference

Electron transfer versus proton transfer in gas-phase ion/ion reactions of polyprotonated peptides

21 January 2018

1 reference

Phosphopeptide anion characterization via sequential charge inversion and electron-transfer dissociation.

21 January 2018

1 reference

Combined electron capture and infrared multiphoton dissociation for multistage MS/MS in a Fourier transform ion cyclotron resonance mass spectrometer.

21 January 2018

1 reference

Multiple neutral loss monitoring (MNM): a multiplexed method for post-translational modification screening.

21 January 2018

1 reference

Sequencing of peptides phosphorylated on serines and threonines by post-source decay in matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Quantification of the compositional information provided by immonium ions on a quadrupole-time-of-flight mass spectrometer

21 January 2018

1 reference

Automated de novo sequencing of proteins by tandem high-resolution mass spectrometry.

21 January 2018

1 reference

Signaling--2000 and beyond

21 January 2018

1 reference

Negative electron transfer dissociation of deprotonated phosphopeptide anions: choice of radical cation reagent and competition between electron and proton transfer

21 January 2018

1 reference

Study of the fragmentation patterns of the phosphate-arginine noncovalent bond

21 January 2018

1 reference

Phosphate stabilization of intermolecular interactions.

21 January 2018

1 reference

The role of phosphorylated residues in peptide-peptide noncovalent complexes formation

21 January 2018

1 reference

Phosphopeptide analysis by positive and negative ion matrix-assisted laser desorption/ionization mass spectrometry.

21 January 2018

1 reference

Femtosecond laser-induced ionization/dissociation of protonated peptides.

21 January 2018

1 reference

Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation.

21 January 2018

1 reference

Mass spectrometric sequencing of linear peptides by product-ion analysis in a reflectron time-of-flight mass spectrometer using matrix-assisted laser desorption ionization

21 January 2018

1 reference

AMPK control of myocardial fatty acid metabolism fluctuates with the intensity of insulin-deficient diabetes.

21 January 2018

1 reference

Time-resolved observation of product ions generated by 157 nm photodissociation of singly protonated phosphopeptides

21 January 2018

1 reference

C alpha-C backbone fragmentation dominates in electron detachment dissociation of gas-phase polypeptide polyanions.

21 January 2018

1 reference

Phosphospecific proteolysis for mapping sites of protein phosphorylation

21 January 2018

1 reference

PhosTShunter: a fast and reliable tool to detect phosphorylated peptides in liquid chromatography Fourier transform tandem mass spectrometry data sets

21 January 2018

1 reference

Specificity of immobilized metal affinity-based IMAC/C18 tip enrichment of phosphopeptides for protein phosphorylation analysis

21 January 2018

1 reference

Sensitive detection of phosphopeptides by matrix-assisted laser desorption/ionization mass spectrometry: use of alkylphosphonic acids as matrix additives

21 January 2018

1 reference

Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns.

21 January 2018

1 reference

Mitochondrial phosphoproteome revealed by an improved IMAC method and MS/MS/MS.

21 January 2018

1 reference

UV photodissociation of phospho-seryl-containing peptides: laser stabilization of the phospho-seryl bond with multistage mass spectrometry.

21 January 2018

1 reference

Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.

21 January 2018

1 reference

An approach to locate phosphorylation sites in a phosphoprotein: mass mapping by combining specific enzymatic degradation with matrix-assisted laser desorption/ionization mass spectrometry

21 January 2018

1 reference

Infrared multiphoton dissociation of large multiply charged ions for biomolecule sequencing

21 January 2018

1 reference

Automatic validation of phosphopeptide identifications from tandem mass spectra

21 January 2018

1 reference

Targeting the protein kinase C family: are we there yet?

21 January 2018

1 reference

Proteomic analysis of post-translational modifications

21 January 2018

1 reference

VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.

21 January 2018

1 reference

Untangling tau hyperphosphorylation in drug design for neurodegenerative diseases.

21 January 2018

1 reference

Analysis of phosphorylated proteins and peptides by mass spectrometry

21 January 2018

1 reference

Improved beta-elimination-based affinity purification strategy for enrichment of phosphopeptides

21 January 2018

1 reference

Electron capture dissociation of gaseous multiply charged ions by Fourier-transform ion cyclotron resonance

21 January 2018

1 reference

Studies on the dephosphorylation of phosphotyrosine-containing peptides during post-source decay in matrix-assisted laser desorption/ionization

21 January 2018

1 reference

Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.

21 January 2018

1 reference

Comprehensive comparison of collision induced dissociation and electron transfer dissociation.

21 January 2018

1 reference

Fragmentation of phosphopeptides by atmospheric pressure MALDI and ESI/Ion trap mass spectrometry

21 January 2018

1 reference

Improving protein identification using complementary fragmentation techniques in fourier transform mass spectrometry

21 January 2018

1 reference

Quantitative phosphoproteomics by mass spectrometry: past, present, and future

21 January 2018

1 reference

Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome

21 January 2018

1 reference

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

21 January 2018

1 reference

Fragmentation pathways of protonated peptides

21 January 2018

1 reference

Evaluation of gas-phase rearrangement and competing fragmentation reactions on protein phosphorylation site assignment using collision induced dissociation-MS/MS and MS3.

21 January 2018

1 reference

Mechanistic insights into the multistage gas-phase fragmentation behavior of phosphoserine- and phosphothreonine-containing peptides

21 January 2018

1 reference

Analysis of receptor signaling pathways by mass spectrometry: identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors

21 January 2018

1 reference

Advances in the analysis of protein phosphorylation.

21 January 2018

1 reference

Immobilized gallium(III) affinity chromatography of phosphopeptides

21 January 2018

1 reference

Coupling of ion-molecule reactions with liquid chromatography on a quadrupole ion trap mass spectrometer

21 January 2018

1 reference

Identification and characterization of posttranslational modifications of proteins by MALDI ion trap mass spectrometry

21 January 2018

1 reference

Leaving group and gas phase neighboring group effects in the side chain losses from protonated serine and its derivatives.

21 January 2018

1 reference

Ultraviolet photofragmentation of biomolecular ions

21 January 2018

1 reference

Proposal for a common nomenclature for sequence ions in mass spectra of peptides

21 January 2018

1 reference

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells

21 January 2018

1 reference

Analysis of protein tyrosine phosphorylation by nanoelectrospray ionization high-resolution tandem mass spectrometry and tyrosine-targeted product ion scanning.

21 January 2018

1 reference

Fast multiple electron capture dissociation in a linear radio frequency quadrupole ion trap

21 January 2018

1 reference

Quantitative phosphoproteomics--an emerging key technology in signal-transduction research

21 January 2018

1 reference

A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry

21 January 2018

1 reference

Observation of phosphorylation site-specific dissociation of singly protonated phosphopeptides

21 January 2018

1 reference

The ABC's (and XYZ's) of peptide sequencing

21 January 2018

1 reference

Detection of tyrosine phosphorylated peptides by precursor ion scanning quadrupole TOF mass spectrometry in positive ion mode

21 January 2018

1 reference

Quadrupole time-of-flight versus triple-quadrupole mass spectrometry for the determination of phosphopeptides by precursor ion scanning

21 January 2018

1 reference

Tyrosine phosphorylation mapping of the epidermal growth factor receptor signaling pathway

21 January 2018

1 reference

Phosphorylation analysis by mass spectrometry: myths, facts, and the consequences for qualitative and quantitative measurements

21 January 2018

1 reference

Phosphoric acid enhances the performance of Fe(III) affinity chromatography and matrix-assisted laser desorption/ionization tandem mass spectrometry for recovery, detection and sequencing of phosphopeptides

21 January 2018

1 reference

Application of different fragmentation techniques for the analysis of phosphopeptides using a hybrid linear ion trap-FTICR mass spectrometer.

21 January 2018

1 reference

Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors

21 January 2018

1 reference

Decision tree-driven tandem mass spectrometry for shotgun proteomics

21 January 2018

1 reference

Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry

21 January 2018

1 reference

On-line liquid chromatography electron capture dissociation for the characterization of phosphorylation sites in proteins

21 January 2018

1 reference

Targeted online liquid chromatography electron capture dissociation mass spectrometry for the localization of sites of in vivo phosphorylation in human Sprouty2.

21 January 2018

1 reference

Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry.

21 January 2018

1 reference

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

21 January 2018

1 reference

Specific photodissociation of peptides with multi-stage mass spectrometry.

21 January 2018

1 reference

Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry

21 January 2018

1 reference

A new approach to phosphoserine and phosphothreonine analysis in peptides and proteins: chemical modification, enrichment via solid-phase reversible binding, and analysis by mass spectrometry

21 January 2018

1 reference

Analytical strategies for phosphoproteomics

21 January 2018

1 reference

Mechanisms of specificity in protein phosphorylation

21 January 2018

1 reference

Evaluation of the utility of neutral-loss-dependent MS3 strategies in large-scale phosphorylation analysis

21 January 2018

1 reference

PhosphoScan: a probability-based method for phosphorylation site prediction using MS2/MS3 pair information.

21 January 2018

1 reference

Application of electron transfer dissociation (ETD) for the analysis of posttranslational modifications

21 January 2018

1 reference

The mighty arginine, the stable quaternary amines, the powerful aromatics, and the aggressive phosphate: their role in the noncovalent minuet

21 January 2018

1 reference

Amazing stability of the arginine-phosphate electrostatic interaction

21 January 2018

1 reference

Amazing stability of phosphate-quaternary amine interactions

21 January 2018

1 reference

Mobile and localized protons: a framework for understanding peptide dissociation

21 January 2018

1 reference

Enhanced ionization of phosphorylated peptides during MALDI TOF mass spectrometry.

21 January 2018

1 reference

Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides

21 January 2018

1 reference

Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry

21 January 2018

1 reference

Femtochemistry: Atomic-Scale Dynamics of the Chemical Bond†

21 January 2018

1 reference

A systematic approach to the analysis of protein phosphorylation

21 January 2018

1 reference

Electron Capture Dissociation of Multiply Charged Protein Cations. A Nonergodic Process

21 January 2018

1 reference

Characterization of rat brain stathmin isoforms by two-dimensional gel electrophoresis-matrix assisted laser desorption/ionization and electrospray ionization-ion trap mass spectrometry.

21 January 2018

1 reference

Selective Isolation at the Femtomole Level of Phosphopeptides from Proteolytic Digests Using 2D-NanoLC-ESI-MS/MS and Titanium Oxide Precolumns

21 January 2018

1 reference