(Q37847582)

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Evaluating the Evolutionary Origins of Unexpected Character Distributions within the Bacterial Planctomycetes-Verrucomicrobia-Chlamydiae Superphylum

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Evaluating the Evolutionary Origins of Unexpected Character Distributions within the Bacterial Planctomycetes-Verrucomicrobia-Chlamydiae Superphylum (English)

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

author name string

A Budd

1

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

D P Devos

2

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

publication date

23 November 2012

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Frontiers in Microbiology

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

3

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

401

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Environmental, genomic and taxonomic perspectives on methanotrophic Verrucomicrobia

1 reference

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Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees.

1 reference

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Keys to eukaryality: planctomycetes and ancestral evolution of cellular complexity.

1 reference

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An evolutionary network of genes present in the eukaryote common ancestor polls genomes on eukaryotic and mitochondrial origin

1 reference

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Controversies in modern evolutionary biology: the imperative for error detection and quality control

1 reference

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Regarding the presence of membrane coat proteins in bacteria: confusion? What confusion?

1 reference

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Microtubules in bacteria: Ancient tubulins build a five-protofilament homolog of the eukaryotic cytoskeleton

1 reference

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Transitional forms between the three domains of life and evolutionary implications

1 reference

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Autotrophic methanotrophy in verrucomicrobia: Methylacidiphilum fumariolicum SolV uses the Calvin-Benson-Bassham cycle for carbon dioxide fixation.

1 reference

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Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function.

1 reference

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Modularity of methylotrophy, revisited

1 reference

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Resolving difficult phylogenetic questions: why more sequences are not enough

1 reference

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Site-specific time heterogeneity of the substitution process and its impact on phylogenetic inference

1 reference

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1 reference

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A new fusion hypothesis for the origin of Eukarya: better than previous ones, but probably also wrong

1 reference

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6 September 2017

Phylogenomics of sterol synthesis: insights into the origin, evolution, and diversity of a key eukaryotic feature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505017

6 September 2017

The compartmentalized bacteria of the planctomycetes-verrucomicrobia-chlamydiae superphylum have membrane coat-like proteins

1 reference

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The primary divisions of life: a phylogenomic approach employing composition-heterogeneous methods

1 reference

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Genome beginnings: rooting the tree of life

1 reference

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Gene tree discordance, phylogenetic inference and the multispecies coalescent

1 reference

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Evolution: revisiting the root of the eukaryote tree

1 reference

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Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

1 reference

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The archaebacterial origin of eukaryotes

1 reference

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6 September 2017

Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia

1 reference

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6 September 2017

Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis

1 reference

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6 September 2017

A mixed branch length model of heterotachy improves phylogenetic accuracy

1 reference

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Characterization and evolution of cell division and cell wall synthesis genes in the bacterial phyla Verrucomicrobia, Lentisphaerae, Chlamydiae, and Planctomycetes and phylogenetic comparison with rRNA genes

1 reference

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Methanotrophy below pH 1 by a new Verrucomicrobia species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505017

6 September 2017

Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505017

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Sterol biosynthesis and prokaryotes-to-eukaryotes evolution

1 reference

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Phylogenomics reshuffles the eukaryotic supergroups

1 reference

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Topological variation in single-gene phylogenetic trees

1 reference

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Bushes in the tree of life

1 reference

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6 September 2017

The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505017

6 September 2017

Phylogenomics: the beginning of incongruence?

1 reference

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MtdC, a novel class of methylene tetrahydromethanopterin dehydrogenases

1 reference

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Analysis of gene islands involved in methanopterin-linked C1 transfer reactions reveals new functions and provides evolutionary insights

1 reference

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Phylogenomics and the reconstruction of the tree of life

1 reference

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Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models

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Bayesian and maximum likelihood phylogenetic analyses of protein sequence data under relative branch-length differences and model violation

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1 reference

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The enigmatic planctomycetes may hold a key to the origins of methanogenesis and methylotrophy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505017

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On the conceptual difficulties in rooting the tree of life

1 reference

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Phylogenetic and biochemical evidence for sterol synthesis in the bacterium Gemmata obscuriglobus

1 reference

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Genes for the cytoskeletal protein tubulin in the bacterial genus Prosthecobacter.

1 reference

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Ancient phylogenetic relationships

1 reference

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1 reference

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1 reference

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On the last common ancestor and early evolution of eukaryotes: reconstructing the history of mitochondrial ribosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/23189077

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The ancestor of the Bacteria domain was a hyperthermophile

1 reference

https://pubmed.ncbi.nlm.nih.gov/23189077

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A non-hyperthermophilic ancestor for Bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/23189077

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum

1 reference

https://pubmed.ncbi.nlm.nih.gov/23189077

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intermediate Steps

1 reference

https://pubmed.ncbi.nlm.nih.gov/23189077

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.3389/FMICB.2012.00401

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

ResearchGate publication ID

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