(Q37863752)

24 August 2017

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title

Skyline-plot methods for estimating demographic history from nucleotide sequences (English)

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24 August 2017

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2

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24 August 2017

1

Simon Y W Ho

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24 August 2017

6 February 2011

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Molecular Ecology Resources

24 August 2017

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24 August 2017

11

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24 August 2017

3

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24 August 2017

423-434

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A new look at the statistical model identification

24 August 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

mtDNA variation predicts population size in humans and reveals a major Southern Asian chapter in human prehistory

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

The effect of ancient DNA damage on inferences of demographic histories

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Ancient DNA analyses exclude humans as the driving force behind late Pleistocene musk ox (Ovibos moschatus) population dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Out of America: ancient DNA evidence for a new world origin of late quaternary woolly mammoths

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Coalescents and genealogical structure under neutrality.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

BEAST: Bayesian evolutionary analysis by sampling trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Measurably evolving populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Bayesian coalescent inference of past population dynamics from molecular sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Relaxed phylogenetics and dating with confidence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Rates of evolutionary change in viruses: patterns and determinants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Revealing the demographic histories of species using DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Bayesian inference of population expansions in domestic bovines

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Recent colonization and radiation of North American Lycaeides (Plebejus) inferred from mtDNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Genetic traces of ancient demography

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Bayesian inference of population size history from multiple loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Bayesian estimation of sequence damage in ancient DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

The effect of inappropriate calibration: three case studies in molecular ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

On the Genealogy of Large Populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Utility of DNA viruses for studying human host history: case study of JC virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Computing Bayes factors using thermodynamic integration.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

The evolutionary rate of tuatara revisited.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Combining contemporary and ancient DNA in population genetic and phylogeographical studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Inference of demographic history from genealogical trees using reversible jump Markov chain Monte Carlo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Coalescence in a metapopulation with recurrent local extinction and recolonization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

APE: Analyses of Phylogenetics and Evolution in R language

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Application of a time-dependent coalescence process for inferring the history of population size changes from DNA sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

GENIE: estimating demographic history from molecular phylogenies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Phylogeography and postglacial expansion of Mus musculus domesticus inferred from mitochondrial DNA coalescent, from Iran to Europe.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Accommodating the effect of ancient DNA damage on inferences of demographic histories

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Rise and fall of the Beringian steppe bison

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

A Bayesian phylogenetic method to estimate unknown sequence ages

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Strong purifying selection in transmission of mammalian mitochondrial DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Withering away--25,000 years of genetic decline preceded cave bear extinction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Exploring the demographic history of DNA sequences using the generalized skyline plot

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Temporal trails of natural selection in human mitogenomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Bayesian selection of continuous-time Markov chain evolutionary models

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

Estimating the rate of evolution of the rate of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

The genealogy of a sequence subject to purifying selection at multiple sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.02988.X

10.1111/J.1755-0998.2011.02988.X

21 January 2018

Identifiers

DOI

1 reference

24 August 2017

1 reference

PubMed ID

21481200