(Q37868141)

1 July 2019

review article

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title

Pre-mRNA splicing: where and when in the nucleus (English)

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1 July 2019

author name string

Joonhee Han

1

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1 July 2019

Ji Xiong

2

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1 July 2019

Dong Wang

3

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1 July 2019

Xiang-Dong Fu

4

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1 July 2019

publication date

21 April 2011

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1 July 2019

published in

Trends in Cell Biology

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1 July 2019

volume

21

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1 July 2019

page(s)

336-343

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1 July 2019

issue

6

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1 July 2019

Differences in the localization and morphology of chromosomes in the human nucleus.

cites work

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Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer

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Stimulatory effect of splicing factors on transcriptional elongation

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Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

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Nuclear speckles: a model for nuclear organelles

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Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: evidence for local euchromatic neighborhoods

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A slow RNA polymerase II affects alternative splicing in vivo

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CLIP identifies Nova-regulated RNA networks in the brain

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Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

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Commitment to splice site pairing coincides with A complex formation

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Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform

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Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors

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Connections between mRNA 3' end processing and transcription termination

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Cotranscriptional spliceosome assembly occurs in a stepwise fashion and requires the cap binding complex.

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Cotranscriptional spliceosome assembly dynamics and the role of U1 snRNA:5'ss base pairing in yeast

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Recruitment of the human TREX complex to mRNA during splicing

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Escaping the nuclear confines: signal-dependent pre-mRNA splicing in anucleate platelets

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Polypyrimidine tract binding protein blocks the 5' splice site-dependent assembly of U2AF and the prespliceosomal E complex

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RNA splicing capability of live neuronal dendrites

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The human SWI/SNF subunit Brm is a regulator of alternative splicing

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In vivo BiFC analysis of Y14 and NXF1 mRNA export complexes: preferential localization within and around SC35 domains

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Alternative splicing: new insights from global analyses

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Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

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Differential recruitment of the splicing machinery during transcription predicts genome-wide patterns of mRNA splicing

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Visualization of RNA transcription and processing

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A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo.

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Cytoplasmic BK(Ca) channel intron-containing mRNAs contribute to the intrinsic excitability of hippocampal neurons

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Associations between distinct pre-mRNA splicing components and the cell nucleus

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Chromatin dynamics and gene positioning

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Spliceosome assembly and composition

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Alternative splicing in disease.

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Where shall we meet? A role for genome organisation and nuclear sub-compartments in mediating interchromosomal interactions.

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Functional integration of transcriptional and RNA processing machineries

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"Nought may endure but mutability": spliceosome dynamics and the regulation of splicing

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The splicing factor SC35 has an active role in transcriptional elongation

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Widespread impact of nonsense-mediated mRNA decay on the yeast intronome

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Alternative isoform regulation in human tissue transcriptomes

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HITS-CLIP yields genome-wide insights into brain alternative RNA processing

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Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules

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An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

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An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

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The spliceosome: design principles of a dynamic RNP machine

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Imaging intracellular RNA distribution and dynamics in living cells

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Cancer-associated regulation of alternative splicing

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DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation.

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Transcription termination by nuclear RNA polymerases

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SR proteins in vertical integration of gene expression from transcription to RNA processing to translation

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Co-transcriptional splicing of constitutive and alternative exons

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Paraspeckles: nuclear bodies built on long noncoding RNA

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Rates of in situ transcription and splicing in large human genes

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"Cotranscriptionality": the transcription elongation complex as a nexus for nuclear transactions

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Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping

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Regulation of alternative splicing by histone modifications

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Chromatin: the final frontier in splicing regulation?

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First come, first served revisited: factors affecting the same alternative splicing event have different effects on the relative rates of intron removal

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Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

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12 December 2020

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

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12 December 2020

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation

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12 December 2020

A role for TREX components in the release of spliced mRNA from nuclear speckle domains

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12 December 2020

Analysis and design of RNA sequencing experiments for identifying isoform regulation

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12 December 2020

Intron retention facilitates splice variant diversity in calcium-activated big potassium channel populations

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12 December 2020

Global Analysis of Nascent RNA Reveals Transcriptional Pausing in Terminal Exons

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12 December 2020

Splicing-dependent RNA polymerase pausing in yeast

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12 December 2020

SR proteins induce alternative exon skipping through their activities on the flanking constitutive exons

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12 December 2020

Epigenetics in alternative pre-mRNA splicing

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12 December 2020

Understanding splicing regulation through RNA splicing maps

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12 December 2020

Ordered splicing of thymidine kinase pre-mRNA during the S phase of the cell cycle

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12 December 2020

Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing

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12 December 2020

Ultrastructural distribution of nuclear ribonucleoproteins as visualized by immunocytochemistry on thin sections

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12 December 2020

Processing of high molecular weight ovalbumin and ovomucoid precursor RNAs to messenger RNA.

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12 December 2020

Localization of pre-mRNA splicing in mammalian nuclei

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12 December 2020

Splicing of Balbiani ring 1 gene pre-mRNA occurs simultaneously with transcription.

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12 December 2020

Disruption of pre-mRNA splicing in vivo results in reorganization of splicing factors

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12 December 2020

Specific commitment of different pre-mRNAs to splicing by single SR proteins

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12 December 2020

Order of intron removal during splicing of endogenous adenine phosphoribosyltransferase and dihydrofolate reductase pre-mRNA.

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12 December 2020

The dynamics of a pre-mRNA splicing factor in living cells

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12 December 2020

10.1016/J.TCB.2011.03.003

Identifiers

DOI

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1 July 2019

PMCID

6553873

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1 July 2019

PubMed ID

21514162

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1 July 2019