(Q37893526)

English

Application of the bacteriophage Mu-driven system for the integration/amplification of target genes in the chromosomes of engineered Gram-negative bacteria--mini review

scientific article published on 23 June 2011

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

8 references

20 June 2019

30 June 2019

14 September 2019

19 September 2019

2 November 2019

3 November 2019

5 August 2020

28 November 2023

Application of the bacteriophage Mu-driven system for the integration/amplification of target genes in the chromosomes of engineered Gram-negative bacteria--mini review (English)

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Gram-negative bacteria

0 references

genetic variation

1 reference

14 September 2019

biomedical investigative technique

1 reference

19 September 2019

1 reference

2 November 2019

1 reference

3 November 2019

1 reference

based on heuristic

inferred from title

insertional mutagenesis

1 reference

5 August 2020

author name string

Valerii Z Akhverdyan

1

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Evgueni R Gak

2

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Irina L Tokmakova

3

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Nataliya V Stoynova

4

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Yurgis A V Yomantas

5

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

Sergey V Mashko

6

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

language of work or name

0 references

publication date

23 June 2011

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

1 August 2011

8 references

20 June 2019

30 June 2019

14 September 2019

19 September 2019

2 November 2019

3 November 2019

5 August 2020

28 November 2023

Applied Microbiology and Biotechnology

9 references

Europe PubMed Central

PMC publication ID

24 August 2017

20 June 2019

30 June 2019

14 September 2019

19 September 2019

2 November 2019

3 November 2019

5 August 2020

28 November 2023

91

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

4

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

857-871

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

copyright license

Creative Commons Attribution-NonCommercial

1 reference

28 November 2023

Phage Mu transposition immunity: protein pattern formation along DNA by a diffusion-ratchet mechanism

1 reference

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Immunity of replicating Mu to self-integration: a novel mechanism employing MuB protein.

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DNA repair by the cryptic endonuclease activity of Mu transposase

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Recombineering: a homologous recombination-based method of genetic engineering

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Mu transposition complex mutagenesis in Lactococcus lactis--identification of genes affecting nisin production.

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Bacteriophage Mu integration in yeast and mammalian genomes

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Dual-In/Out strategy for genes integration into bacterial chromosome: a novel approach to step-by-step construction of plasmid-less marker-less recombinant E. coli strains with predesigned genome structure.

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Unique contacts direct high-priority recognition of the tetrameric Mu transposase-DNA complex by the AAA+ unfoldase ClpX

1 reference

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Genome of Methylobacillus flagellatus, molecular basis for obligate methylotrophy, and polyphyletic origin of methylotrophy

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Recombineering: in vivo genetic engineering in E. coli, S. enterica, and beyond

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The mu transpososome through a topological lens

1 reference

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Chromosomal integration mechanism of infecting mu virion DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

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Multicopy integration and expression of heterologous genes in Methylobacterium extorquens ATCC 55366.

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Tuning of expression level of the genes of interest located in the bacterial chromosome

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The transpososome: control of transposition at the level of catalysis.

1 reference

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The yeaS (leuE) gene of Escherichia coli encodes an exporter of leucine, and the Lrp protein regulates its expression.

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Generation of transposon insertion mutant libraries for Gram-positive bacteria by electroporation of phage Mu DNA transposition complexes.

1 reference

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New tool for metabolic pathway engineering in Escherichia coli: one-step method to modulate expression of chromosomal genes

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Novel mutants of Erwinia carotovora subsp. carotovora defective in the production of plant cell wall degrading enzymes generated by Mu transpososome-mediated insertion mutagenesis

1 reference

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Microarray analysis of transposition targets in Escherichia coli: the impact of transcription

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IHF and HU: flexible architects of bent DNA.

1 reference

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Plasmid copy number and plasmid stability

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A unique right end-enhancer complex precedes synapsis of Mu ends: the enhancer is sequestered within the transpososome throughout transposition

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Genetic engineering using homologous recombination

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Efficient insertion mutagenesis strategy for bacterial genomes involving electroporation of in vitro-assembled DNA transposition complexes of bacteriophage mu

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Chromosomal editing in Escherichia coli. Vectors for DNA integration and excision

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Mutant loxP vectors for selectable marker recycle and conditional knock-outs

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Handoff from recombinase to replisome: insights from transposition

1 reference

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Differential role of the Mu B protein in phage Mu integration vs. replication: mechanistic insights into two transposition pathways

1 reference

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Comparative architecture of transposase and integrase complexes

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

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Identification of residues in the Mu transposase essential for catalysis

1 reference

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The phage Mu transpososome core: DNA requirements for assembly and function

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Infecting bacteriophage Mu DNA forms a circular DNA-protein complex

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Supercoils in prokaryotic DNA restrained in vivo

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8 In vivo genetic engineering with bacteriophage Mu

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Molecular Biology of Bacteriophage Mu

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Single-cell protein

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Transposition of phage Mu DNA.

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Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources

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Site-specific integration of DNA into wild-type and mutant lox sites placed in the plant genome.

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Site-specific recognition of the bacteriophage mu ends by the mu a protein

1 reference

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Transposition studies of mini-Mu plasmids constructed from the chemically synthesized ends of bacteriophage Mu.

1 reference

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Mechanism of transposition of bacteriophage Mu: structure of a transposition intermediate.

1 reference

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23 June 2018

Interaction of distinct domains in Mu transposase with Mu DNA ends and an internal transpositional enhancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

23 June 2018

Inversion of the phosphate chirality at the target site of Mu DNA strand transfer: Evidence for a one-step transesterification mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

23 June 2018

Role of the A protein-binding sites in the in vitro transposition of mu DNA. A complex circuit of interactions involving the mu ends and the transpositional enhancer

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Use of the valine biosynthetic pathway to convert glucose into isobutanol.

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A mini-Mu transposon-based method for multiple DNA fragment integration into bacterial genomes

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Stabilized gene duplication enables long-term selection-free heterologous pathway expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

[New method of construction of artificial translational-coupled operons in bacterial chromosome]

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Phage Mu-driven two-plasmid system for integration of recombinant DNA in the Methylophilus methylotrophus genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

YddG from Escherichia coli promotes export of aromatic amino acids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Enhancement of L-lysine production in methylotroph Methylophilus methylotrophus by introducing a mutant LysE exporter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

L-Lysine biosynthetic pathway of Methylophilus methylotrophus and construction of an L-lysine producer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Host factors that promote transpososome disassembly and the PriA-PriC pathway for restart primosome assembly.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Production of heterologous protein by Methylobacterium extorquens in high cell density fermentation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Development of an insertional expression vector system for Methylobacterium extorquens AM1 and generation of null mutants lacking mtdA and/or fch.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Overexpression of a heterologous protein, haloalkane dehalogenase, in a poly-beta-hydroxybutyrate-deficient strain of the facultative methylotroph Methylobacterium extorquens AM1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Development of improved versatile broad-host-range vectors for use in methylotrophs and other Gram-negative bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Anatomy of a flexer-DNA complex inside a higher-order transposition intermediate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

A chromosomal expression vector for Escherichia coli based on the bacteriophage Mu.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

In vitro and in vivo manipulations of bacteriophage Mu DNA: Cloning of Mu ends and construction of mini-Mu's carrying selectable markers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

Heteroduplex structures of bacteriophage Mu DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3145075

1 September 2018

[Cloning, expression and comparative analysis of peroxiredoxine 6 from different species]

1 reference

https://api.crossref.org/works/10.1007%2FS00253-011-3416-Y

21 January 2018

Amino Acid Production from Methanol by Methylobacillus glycogenes Mutants: Isolation of L-Glutamic Acid Hyper-producing Mutants from M. glycogenes Strains, and Derivation of L-Threonine and L-Lysine-producing Mutants from Them.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-011-3416-Y

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-011-3416-Y

21 January 2018

Transposition without duplication of infecting bacteriophage Mu DNA

1 reference

https://api.crossref.org/works/10.1007%2FS00253-011-3416-Y

21 January 2018

Assembly of phage Mu transpososomes: cooperative transitions assisted by protein and DNA scaffolds

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for a conservative pathway of transposition of bacteriophage Mu

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient Mu transposition requires interaction of transposase with a DNA sequence at the Mu operator: implications for regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Positive and negative regulation of the Mu operator by Mu repressor and Escherichia coli integration host factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions of phage Mu enhancer and termini that specify the assembly of a topologically unique interwrapped transpososome

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Three-site synapsis during Mu DNA transposition: a critical intermediate preceding engagement of the active site

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Broad host range vectors derived from an RSF1010::Tn1 plasmid

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High frequency mobilization of gram-negative bacterial replicons by the in vitro constructed Tn5-Mob transposon

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutational analysis of the Mu transposase. Contributions of two distinct regions of domain II to recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Mu transpositional enhancer can function in trans: Requirement of the enhancer for synapsis but not strand cleavage

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Path of DNA within the Mu transpososome. Transposase interactions bridging two Mu ends and the enhancer trap five DNA supercoils

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA transposition of bacteriophage Mu. A quantitative analysis of target site selection in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A method for construction of E. coli strains with multiple DNA insertions in the chromosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mu transpositional recombination: donor DNA cleavage and strand transfer in trans by the Mu transposase

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of transposition of bacteriophage mu: polarity of the strand transfer reaction at the initiation of transposition

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plasmids related to the broad host range vector, pRK290, useful for gene cloning and for monitoring gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA gyrase requirements distinguish the alternate pathways of Mu transposition

1 reference

https://pubmed.ncbi.nlm.nih.gov/21698377

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00253-011-3416-Y

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

release_emws6j6xanhftg6u4ohgivjtwi

1 reference

https://api.fatcat.wiki/v0/release/emws6j6xanhftg6u4ohgivjtwi

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

24 August 2017

ResearchGate publication ID

0 references

Sitelinks

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