(Q37945702)

25 August 2017

Joint analysis of demography and selection in population genetics: where do we stand and where could we go? (English)

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25 August 2017

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3

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25 August 2017

Martin Lascoux

6

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author name string

Junrui Li

1

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25 August 2017

Haipeng Li

2

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25 August 2017

Sen Li

4

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25 August 2017

Per Sjödin

5

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25 August 2017

language of work or name

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14 October 2011

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25 August 2017

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25 August 2017

21

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25 August 2017

1

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25 August 2017

28-44

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Effective population size and the efficacy of selection on the X chromosomes of two closely related Drosophila species

25 August 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A new approach to estimate parameters of speciation models with application to apes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Hotspots of biased nucleotide substitutions in human genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

ABC as a flexible framework to estimate demography over space and time: some cons, many pros

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Deep divergences of human gene trees and models of human origins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Genome-wide analysis of a long-term evolution experiment with Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Characterization of X-linked SNP genotypic variation in globally distributed human populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

The genetic architecture of parallel armor plate reduction in threespine sticklebacks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Approximate Bayesian Computation (ABC) in practice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A selection model of molecular evolution incorporating the effective population size

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Estimators of the human effective sex ratio detect sex biases on different timescales

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Genetic Consequences of Range Expansions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

IS THE POPULATION SIZE OF A SPECIES RELEVANT TO ITS EVOLUTION?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Analyses of X-linked and autosomal genetic variation in population-scale whole genome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Sampling theory for neutral alleles in a varying environment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A composite of multiple signals distinguishes causal variants in regions of positive selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Toward a selection theory of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A Mathematical Theory of Natural and Artificial Selection, Part V: Selection and Mutation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A flexible forward simulator for populations subject to selection and demography

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Classic selective sweeps were rare in recent human evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Characterizing the influence of effective population size on the rate of adaptation: Gillespie's Darwin domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

On the utility of linkage disequilibrium as a statistic for identifying targets of positive selection in nonequilibrium populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

An approximate bayesian estimator suggests strong, recurrent selective sweeps in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Genome-wide effects of long-term divergent selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Evidence that adaptation in Drosophila is not limited by mutation at single sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Accelerated genetic drift on chromosome X during the human dispersal out of Africa

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Signatures of recent directional selection under different models of population expansion during colonization of new selective environments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Ancestral Processes with Selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Highly punctuated patterns of population structure on the X chromosome and implications for African evolutionary history

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Inferring the demographic history and rate of adaptive substitution in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

"Reverse ecology" and the power of population genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Distinguishing positive selection from neutral evolution: boosting the performance of summary statistics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A reduced representation approach to population genetic analyses and applications to human evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Non-equilibrium allele frequency spectra via spectral methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Why did modern human populations disperse from Africa ca. 60,000 years ago? A new model

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Evolution of a finite population under gene conversion

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Darwinian and demographic forces affecting human protein coding genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Fitness and its role in evolutionary genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Searching for footprints of positive selection in whole-genome SNP data from nonequilibrium populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Population growth of human Y chromosomes: a study of Y chromosome microsatellites

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Genealogies and weak purifying selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Positive natural selection in the human lineage

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Pervasive adaptive protein evolution apparent in diversity patterns around amino acid substitutions in Drosophila simulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Pervasive natural selection in the Drosophila genome?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

The population genomics of plant adaptation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

On the meaning and existence of an effective population size

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

SelSim: a program to simulate population genetic data with natural selection and recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Detecting strong positive selection in the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

mbs: modifying Hudson's ms software to generate samples of DNA sequences with a biallelic site under selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

From Galton to GWAS: quantitative genetics of human height

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

A map of recent positive selection in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Simultaneous inference of selection and population growth from patterns of variation in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

The effects of artificial selection on the maize genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Studying patterns of recent evolution at synonymous sites and intronic sites in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

Statistical tests for detecting positive selection by utilizing high-frequency variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2011.05308.X

10.1111/J.1365-294X.2011.05308.X

21 January 2018

Identifiers

DOI

1 reference

25 August 2017

1 reference