(Q37952115)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22048664%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

Controlling gene expression in response to stress (English)

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15 January 2020

1

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15 January 2020

Francesc Posas

series ordinal

3

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15 January 2020

author name string

Gustav Ammerer

series ordinal

2

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15 January 2020

publication date

3 November 2011

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15 January 2020

published in

Nature Reviews Genetics

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15 January 2020

volume

12

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15 January 2020

issue

12

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15 January 2020

page(s)

833-845

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https://scigraph.springernature.com/pub.10.1038/nrg3055

15 January 2020

exact match

0 references

cites work

Mechanisms of activation and regulation of the heat shock-sensitive signaling pathways

1 reference

The heat shock response: life on the verge of death

31 March 2020

1 reference

Function and regulation in MAPK signaling pathways: lessons learned from the yeast Saccharomyces cerevisiae

31 March 2020

1 reference

MAPK signalling in cellular metabolism: stress or wellness?

31 March 2020

1 reference

Osmotic stress signaling and osmoadaptation in yeasts

31 March 2020

1 reference

31 March 2020

1 reference

Yeast go the whole HOG for the hyperosmotic response

31 March 2020

1 reference

When the stress of your environment makes you go HOG wild

31 March 2020

1 reference

Heat shock factors: integrators of cell stress, development and lifespan.

31 March 2020

1 reference

Drosophila heat shock system as a general model to investigate transcriptional regulation

31 March 2020

1 reference

Novel aspects of heat shock factors: DNA recognition, chromatin modulation and gene expression

31 March 2020

1 reference

Toward a genomic view of the gene expression program regulated by osmostress in yeast

31 March 2020

1 reference

Multilayered control of gene expression by stress-activated protein kinases.

31 March 2020

1 reference

Inducible gene expression: diverse regulatory mechanisms

31 March 2020

1 reference

Remodeling of yeast genome expression in response to environmental changes

31 March 2020

1 reference

Genomic expression programs in the response of yeast cells to environmental changes

31 March 2020

1 reference

Full genome gene expression analysis of the heat stress response in Drosophila melanogaster

31 March 2020

1 reference

Transcript expression in Saccharomyces cerevisiae at high salinity

31 March 2020

1 reference

Phosphorylated Ssk1 prevents unphosphorylated Ssk1 from activating the Ssk2 mitogen-activated protein kinase kinase kinase in the yeast high-osmolarity glycerol osmoregulatory pathway

31 March 2020

1 reference

Effects of osmolytes on the SLN1-YPD1-SSK1 phosphorelay system from Saccharomyces cerevisiae

31 March 2020

1 reference

Signal transduction via the histidyl-aspartyl phosphorelay

31 March 2020

1 reference

Transmembrane mucins Hkr1 and Msb2 are putative osmosensors in the SHO1 branch of yeast HOG pathway.

31 March 2020

1 reference

Dynamic control of yeast MAP kinase network by induced association and dissociation between the Ste50 scaffold and the Opy2 membrane anchor.

31 March 2020

1 reference

Mucins, osmosensors in eukaryotic cells?

31 March 2020

1 reference

Activation of the chaperone Hsp26 is controlled by the rearrangement of its thermosensor domain

31 March 2020

1 reference

31 March 2020

Microbial thermosensors.

1 reference

An internal thermal sensor controlling temperature preference in Drosophila

31 March 2020

1 reference

Ambient thermometers in plants: from physiological outputs towards mechanisms of thermal sensing

31 March 2020

1 reference

Mammalian mitogen-activated protein kinase signal transduction pathways activated by stress and inflammation

31 March 2020

1 reference

Signal integration by JNK and p38 MAPK pathways in cancer development

31 March 2020

1 reference

Mechanisms and functions of p38 MAPK signalling.

31 March 2020

1 reference

Role of mitogen-activated protein kinase kinase kinases in signal integration

31 March 2020

1 reference

Robustness and fragility in the yeast high osmolarity glycerol (HOG) signal-transduction pathway

31 March 2020

1 reference

Stimulus-specific distinctions in spatial and temporal dynamics of stress-activated protein kinase kinase kinases revealed by a fluorescence resonance energy transfer biosensor

31 March 2020

1 reference

MAP kinase-mediated stress relief that precedes and regulates the timing of transcriptional induction

31 March 2020

1 reference

Stress-activated genomic expression changes serve a preparative role for impending stress in yeast

31 March 2020

1 reference

Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation

31 March 2020

1 reference

Stress resistance and signal fidelity independent of nuclear MAPK function

31 March 2020

1 reference

Structure and function of a transcriptional network activated by the MAPK Hog1.

31 March 2020

1 reference

Dynamic and complex transcription factor binding during an inducible response in yeast

31 March 2020

1 reference

Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast

31 March 2020

1 reference

Transcription Factor and Polymerase Recruitment, Modification, and Movement on dhsp70 In Vivo in the Minutes following Heat Shock

31 March 2020

1 reference

Combination of two activating mutations in one HOG1 gene forms hyperactive enzymes that induce growth arrest

31 March 2020

1 reference

Sir2 histone deacetylase prevents programmed cell death caused by sustained activation of the Hog1 stress-activated protein kinase

31 March 2020

1 reference

AKT and oxidative stress team up to kill cancer cells.

31 March 2020

1 reference

Integrative model of the response of yeast to osmotic shock

31 March 2020

1 reference

Control of high osmolarity signalling in the yeast Saccharomyces cerevisiae

31 March 2020

1 reference

Feedback loops shape cellular signals in space and time

31 March 2020

1 reference

Fine regulation of Saccharomyces cerevisiae MAPK pathways by post-translational modifications.

31 March 2020

1 reference

The frequency dependence of osmo-adaptation in Saccharomyces cerevisiae

31 March 2020

1 reference

A systems-level analysis of perfect adaptation in yeast osmoregulation

31 March 2020

1 reference

Dynamic signaling in the Hog1 MAPK pathway relies on high basal signal transduction.

31 March 2020

1 reference

Comparative genomics of the environmental stress response in ascomycete fungi

31 March 2020

1 reference

The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress

31 March 2020

1 reference

Diverse and specific gene expression responses to stresses in cultured human cells

31 March 2020

1 reference

Whole genome analysis of p38 SAPK-mediated gene expression upon stress.

31 March 2020

1 reference

Functional profiling of the Saccharomyces cerevisiae genome

31 March 2020

1 reference

Selective requirement for SAGA in Hog1-mediated gene expression depending on the severity of the external osmostress conditions

31 March 2020

1 reference

Genome-wide identification of genes involved in tolerance to various environmental stresses in Saccharomyces cerevisiae.

31 March 2020

1 reference

The Rpd3L HDAC complex is essential for the heat stress response in yeast.

31 March 2020

1 reference

Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes.

31 March 2020

1 reference

Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress

31 March 2020

1 reference

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

31 March 2020

1 reference

Functional interplay between chromatin remodeling complexes RSC, SWI/SNF and ISWI in regulation of yeast heat shock genes

31 March 2020

1 reference

A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces

31 March 2020

1 reference

Cooperation between the INO80 complex and histone chaperones determines adaptation of stress gene transcription in the yeast Saccharomyces cerevisiae

31 March 2020

1 reference

Nucleosome organization in the Drosophila genome.

31 March 2020

1 reference

Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

31 March 2020

1 reference

Sodium salicylate decreases intracellular ATP, induces both heat shock factor binding and chromosomal puffing, but does not induce hsp 70 gene transcription in Drosophila.

31 March 2020

1 reference

Transient activation of the HOG MAPK pathway regulates bimodal gene expression.

31 March 2020

1 reference

The MAPK Hog1 recruits Rpd3 histone deacetylase to activate osmoresponsive genes.

31 March 2020

1 reference

Chromatin landscape dictates HSF binding to target DNA elements

31 March 2020

1 reference

HistoneHits: a database for histone mutations and their phenotypes

31 March 2020

1 reference

Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock

31 March 2020

1 reference

Changes in genomewide occupancy of core transcriptional regulators during heat stress

31 March 2020

1 reference

Osmostress-induced transcription by Hot1 depends on a Hog1-mediated recruitment of the RNA Pol II.

31 March 2020

1 reference

Regulation of the Sko1 transcriptional repressor by the Hog1 MAP kinase in response to osmotic stress

31 March 2020

1 reference

Targeting the MEF2-like transcription factor Smp1 by the stress-activated Hog1 mitogen-activated protein kinase

31 March 2020

1 reference

Activated signal transduction kinases frequently occupy target genes

31 March 2020

1 reference

Yeast Mpk1 mitogen-activated protein kinase activates transcription through Swi4/Swi6 by a noncatalytic mechanism that requires upstream signal

31 March 2020

1 reference

Nutrient regulates Tor1 nuclear localization and association with rDNA promoter.

31 March 2020

1 reference

Proteins kinases: chromatin-associated enzymes?

31 March 2020

1 reference

Cell signaling. Protein kinases seek close encounters with active genes

31 March 2020

1 reference

Stress-induced map kinase Hog1 is part of transcription activation complexes.

31 March 2020

1 reference

The Stress-Activated Hog1 Kinase Is a Selective Transcriptional Elongation Factor for Genes Responding to Osmotic Stress

31 March 2020

1 reference

Genome-wide location analysis of the stress-activated MAP kinase Hog1 in yeast.

31 March 2020

1 reference

Control of Ubp3 ubiquitin protease activity by the Hog1 SAPK modulates transcription upon osmostress.

31 March 2020

1 reference

The p38 SAPK is recruited to chromatin via its interaction with transcription factors

31 March 2020

1 reference

p38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci

31 March 2020

1 reference

Functional interdependence at the chromatin level between the MKK6/p38 and IGF1/PI3K/AKT pathways during muscle differentiation.

31 March 2020

1 reference

Induction of Progesterone Target Genes Requires Activation of Erk and Msk Kinases and Phosphorylation of Histone H3

31 March 2020

1 reference

Mitogen-induced recruitment of ERK and MSK to SRE promoter complexes by ternary complex factor Elk-1.

31 March 2020

1 reference

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

31 March 2020

1 reference

RNA polymerase is poised for activation across the genome

31 March 2020

1 reference

A chromatin landmark and transcription initiation at most promoters in human cells

31 March 2020

1 reference

Imaging Drosophila gene activation and polymerase pausing in vivo

31 March 2020

1 reference

Transcription regulation through promoter-proximal pausing of RNA polymerase II.

31 March 2020

1 reference

Paused RNA polymerase II as a developmental checkpoint

31 March 2020

1 reference

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

31 March 2020

1 reference

Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells

31 March 2020

1 reference

Repression of heat shock transcription factor HSF1 activation by HSP90 (HSP90 complex) that forms a stress-sensitive complex with HSF1

31 March 2020

1 reference

The heat shock factor family and adaptation to proteotoxic stress

31 March 2020

1 reference

Poised polymerases: on your mark...get set...go!

31 March 2020

1 reference

NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila

31 March 2020

1 reference

RNA polymerase II promoter-proximal pausing upregulates c-fos gene expression

31 March 2020

1 reference

Mitogen-activated protein kinase-activated protein kinase 2 regulates tumor necrosis factor mRNA stability and translation mainly by altering tristetraprolin expression, stability, and binding to adenine/uridine-rich element

31 March 2020

1 reference

Control of mRNA decay by phosphorylation of tristetraprolin.

31 March 2020

1 reference

p38 Mitogen-activated protein kinase stabilizes SMN mRNA through RNA binding protein HuR.

31 March 2020

1 reference

p38 Mitogen-activated protein kinase- and HuR-dependent stabilization of p21(Cip1) mRNA mediates the G(1)/S checkpoint

31 March 2020

1 reference

Heat shock response in yeast involves changes in both transcription rates and mRNA stabilities

31 March 2020

1 reference

mRNA stability changes precede changes in steady-state mRNA amounts during hyperosmotic stress

31 March 2020

1 reference

Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae.

31 March 2020

1 reference

Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation

31 March 2020

1 reference

Translational regulation of gene expression during conditions of cell stress

31 March 2020

1 reference

Heat shock increases the association of binding protein-1 with initiation factor 4E

31 March 2020

1 reference

The phosphorylation of eukaryotic initiation factor eIF4E in response to phorbol esters, cell stresses, and cytokines is mediated by distinct MAP kinase pathways

31 March 2020

1 reference

The p36 isoform of BAG-1 is translated by internal ribosome entry following heat shock

31 March 2020

1 reference

Expression of poly(A)-binding protein is upregulated during recovery from heat shock in HeLa cells

31 March 2020

1 reference

The HOG pathway dictates the short-term translational response after hyperosmotic shock

31 March 2020

1 reference

Transient inhibition of translation initiation by osmotic stress

31 March 2020

1 reference

Rck2 kinase is a substrate for the osmotic stress-activated mitogen-activated protein kinase Hog1.

31 March 2020

1 reference

Rck2, a member of the calmodulin-protein kinase family, links protein synthesis to high osmolarity MAP kinase signaling in budding yeast

31 March 2020

1 reference

GPD1, which encodes glycerol-3-phosphate dehydrogenase, is essential for growth under osmotic stress in Saccharomyces cerevisiae, and its expression is regulated by the high-osmolarity glycerol response pathway

31 March 2020

1 reference

Dealing with osmostress through MAP kinase activation.

31 March 2020

1 reference

Control of cell cycle in response to osmostress: lessons from yeast.

31 March 2020

1 reference

Signal transduction by MAP kinase cascades in budding yeast

31 March 2020

1 reference

Regulated nucleo/cytoplasmic exchange of HOG1 MAPK requires the importin beta homologs NMD5 and XPO1.

31 March 2020

1 reference

Kinase activity-dependent nuclear export opposes stress-induced nuclear accumulation and retention of Hog1 mitogen-activated protein kinase in the budding yeast Saccharomyces cerevisiae

31 March 2020

1 reference

Regulation of the osmoregulatory HOG MAPK cascade in yeast

31 March 2020

1 reference

MAP kinases and the adaptive response to hypertonicity: functional preservation from yeast to mammals

31 March 2020

1 reference

Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation.

31 March 2020

1 reference

MSK activation and physiological roles

31 March 2020

1 reference

p38 MAP-kinases pathway regulation, function and role in human diseases

31 March 2020

1 reference

ERK and p38 MAPK-activated protein kinases: a family of protein kinases with diverse biological functions

31 March 2020

1 reference

p38 MAPK signaling regulates recruitment of Ash2L-containing methyltransferase complexes to specific genes during differentiation

31 March 2020

1 reference

NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

31 March 2020

1 reference

ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.

31 March 2020

1 reference

Identification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element

31 March 2020

1 reference

DNA sequence requirements for generating paused polymerase at the start of hsp70

31 March 2020

1 reference

Phosphorylation of mammalian eIF4E by Mnk1 and Mnk2: tantalizing prospects for a role in translation.

31 March 2020

1 reference

12 December 2020

Why do cells require heat shock proteins to survive heat stress?

1 reference

12 December 2020

Chaperoning signaling pathways: molecular chaperones as stress-sensing 'heat shock' proteins.

1 reference

12 December 2020

Chaperone hsp27 inhibits translation during heat shock by binding eIF4G and facilitating dissociation of cap-initiation complexes

1 reference

12 December 2020

P-TEFb kinase recruitment and function at heat shock loci

1 reference

12 December 2020

The FPS1 gene product functions as a glycerol facilitator in the yeast Saccharomyces cerevisiae

1 reference

12 December 2020

Identifiers

DOI

10.1038/NRG3055

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22048664%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference