(Q37975970)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22246699%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

title

Mass spectrometry-based proteomics strategies for protease cleavage site identification (English)

1 reference

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20 January 2020

2

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20 January 2020

author name string

Bart H J van den Berg

series ordinal

1

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20 January 2020

publication date

19 January 2012

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20 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22246699%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22246699%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

issue

4-5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22246699%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

page(s)

516-529

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22246699%20AND%20SRC:MED&resulttype=core&format=json

Proteases in cutaneous malignant melanoma: relevance as biomarker and therapeutic target.

20 January 2020

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Protease proteomics: revealing protease in vivo functions using systems biology approaches

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Species specificity of ADAM10 and ADAM17 proteins in interleukin-6 (IL-6) trans-signaling and novel role of ADAM10 in inducible IL-6 receptor shedding

21 January 2018

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Thrombin induces broad spectrum proteolysis in human serum samples

21 January 2018

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Does trypsin cut before proline?

21 January 2018

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Proteome-derived, database-searchable peptide libraries for identifying protease cleavage sites

21 January 2018

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Protease specificity determination by using cellular libraries of peptide substrates (CLiPS).

21 January 2018

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Substrate phage: selection of protease substrates by monovalent phage display

21 January 2018

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Rapid identification of highly active and selective substrates for stromelysin and matrilysin using bacteriophage peptide display libraries

21 January 2018

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Peptide libraries: determination of relative reaction rates of protected amino acids in competitive couplings

21 January 2018

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A combinatorial approach for determining protease specificities: application to interleukin-1beta converting enzyme (ICE)

21 January 2018

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Substrate activity screening (SAS): a general procedure for the preparation and screening of a fragment-based non-peptidic protease substrate library for inhibitor discovery

21 January 2018

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Proteomic techniques and activity-based probes for the system-wide study of proteolysis

21 January 2018

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Methods for mapping protease specificity

21 January 2018

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Activity-based probes as a tool for functional proteomic analysis of proteases.

21 January 2018

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21 January 2018

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Using specificity to strategically target proteases

21 January 2018

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Quantification of peptides for the monitoring of protease-catalyzed reactions by matrix-assisted laser desorption/ionization mass spectrometry using ionic liquid matrixes

21 January 2018

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Quantitative matrix-assisted laser desorption/ionization mass spectrometry for the determination of enzyme activities

21 January 2018

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21 January 2018

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21 January 2018

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A proteomic approach for the discovery of protease substrates

21 January 2018

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Identification of proteolytic cleavage sites by quantitative proteomics

21 January 2018

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A quantitative proteomics design for systematic identification of protease cleavage events.

21 January 2018

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21 January 2018

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Multiplexed protease assays using element-tagged substrates

21 January 2018

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21 January 2018

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Protease degradomics: mass spectrometry discovery of protease substrates and the CLIP-CHIP, a dedicated DNA microarray of all human proteases and inhibitors

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Broad coverage identification of multiple proteolytic cleavage site sequences in complex high molecular weight proteins using quantitative proteomics as a complement to edman sequencing

21 January 2018

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21 January 2018

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21 January 2018

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A statistics-based platform for quantitative N-terminome analysis and identification of protease cleavage products

21 January 2018

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Proteomic analyses reveal an acidic prime side specificity for the astacin metalloprotease family reflected by physiological substrates

21 January 2018

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Matrix metalloproteinase processing of CXCL11/I-TAC results in loss of chemoattractant activity and altered glycosaminoglycan binding

21 January 2018

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Chromatographic isolation of methionine-containing peptides for gel-free proteome analysis: identification of more than 800 Escherichia coli proteins

21 January 2018

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The Degradome database: mammalian proteases and diseases of proteolysis

21 January 2018

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PMAP: databases for analyzing proteolytic events and pathways

21 January 2018

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The Pfam protein families database

21 January 2018

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21 January 2018

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Comparative protein structure modeling using Modeller

21 January 2018

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TopFIND, a knowledgebase linking protein termini with function.

21 January 2018

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The CASBAH: a searchable database of caspase substrates

21 January 2018

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Peptide and protein quantification: a map of the minefield.

21 January 2018

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A uniform proteomics MS/MS analysis platform utilizing open XML file formats

21 January 2018

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TOPP--the OpenMS proteomics pipeline

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201100379

Sequence logos: a new way to display consensus sequences

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201100379

Two Sample Logo: a graphical representation of the differences between two sets of sequence alignments

21 January 2018

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WebLogo: A Sequence Logo Generator

21 January 2018

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Characterization of the prime and non-prime active site specificities of proteases by proteome-derived peptide libraries and tandem mass spectrometry.

21 January 2018

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Structural determinants of limited proteolysis

21 January 2018

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GPS-CCD: a novel computational program for the prediction of calpain cleavage sites

21 January 2018

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GraBCas: a bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences

21 January 2018

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CASVM: web server for SVM-based prediction of caspase substrates cleavage sites

21 January 2018

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Cascleave: towards more accurate prediction of caspase substrate cleavage sites

21 January 2018

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Prediction of protease substrates using sequence and structure features

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201100379

Access to cellulose limits the efficiency of enzymatic hydrolysis: the role of amorphogenesis

21 January 2018

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Phospholipase A2 as a probe of phospholipid distribution in erythrocyte membranes. Factors influencing the apparent specificity of the reaction

21 January 2018

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Suborganellar localization of proteinase catalyzing the limited hydrolysis of pumpkin globulin.

21 January 2018

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Internally quenched fluorescent peptide substrates disclose the subsite preferences of human caspases 1, 3, 6, 7 and 8

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201100379

Mass spectrometry-based proteomics turns quantitative

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201100379

Proteomic study of human glioblastoma multiforme tissue employing complementary two-dimensional liquid chromatography- and mass spectrometry-based approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100379

Multidimensional degradomics identifies systemic autoantigens and intracellular matrix proteins as novel gelatinase B/MMP-9 substrates

21 January 2018

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Improved visualization of protein consensus sequences by iceLogo

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/PMIC.201100379

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22246699%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

1 reference