(Q38132669)

29 August 2017

title

The RNA exosome and proteasome: common principles of degradation control (English)

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29 August 2017

Debora L Makino

1

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29 August 2017

Felix Halbach

series ordinal

2

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29 August 2017

Elena Conti

series ordinal

3

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29 August 2017

publication date

29 August 2013

1 reference

Nature Reviews Molecular Cell Biology

29 August 2017

published in

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29 August 2017

volume

14

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29 August 2017

issue

10

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29 August 2017

page(s)

654-660

1 reference

https://scigraph.springernature.com/pub.10.1038/nrm3657

29 August 2017

exact match

0 references

cites work

RNA quality control in eukaryotes

1 reference

Cellular strategies of protein quality control

31 March 2020

1 reference

Proteolysis: from the lysosome to ubiquitin and the proteasome

31 March 2020

1 reference

The proteasome: paradigm of a self-compartmentalizing protease

31 March 2020

1 reference

Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution

31 March 2020

1 reference

Structure of 20S proteasome from yeast at 2.4 A resolution

31 March 2020

1 reference

Proteasome from Thermoplasma acidophilum: a threonine protease

31 March 2020

1 reference

The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

31 March 2020

1 reference

The exosome: a proteasome for RNA?

31 March 2020

1 reference

mRNA stability in eukaryotes

31 March 2020

1 reference

Functions of the cytoplasmic exosome

31 March 2020

1 reference

The archaeal exosome core is a hexameric ring structure with three catalytic subunits

31 March 2020

1 reference

Structural framework for the mechanism of archaeal exosomes in RNA processing

31 March 2020

1 reference

Structural basis of 3' end RNA recognition and exoribonucleolytic cleavage by an exosome RNase PH core

31 March 2020

1 reference

The exosome and the proteasome: nano-compartments for degradation

31 March 2020

1 reference

The exosome: a macromolecular cage for controlled RNA degradation

31 March 2020

1 reference

Reconstitution, activities, and structure of the eukaryotic RNA exosome

31 March 2020

1 reference

A single subunit, Dis3, is essentially responsible for yeast exosome core activity

31 March 2020

1 reference

The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation

31 March 2020

1 reference

RNA channelling by the eukaryotic exosome

31 March 2020

1 reference

Exo- and endoribonucleolytic activities of yeast cytoplasmic and nuclear RNA exosomes are dependent on the noncatalytic core and central channel.

31 March 2020

1 reference

Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex

31 March 2020

1 reference

Near-atomic resolution structural model of the yeast 26S proteasome.

31 March 2020

1 reference

Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach

31 March 2020

1 reference

Complete subunit architecture of the proteasome regulatory particle

31 March 2020

1 reference

Structural biology of the proteasome

31 March 2020

1 reference

20S proteasomes have the potential to keep substrates in store for continual degradation.

31 March 2020

1 reference

Contribution of proteasomal beta-subunits to the cleavage of peptide substrates analyzed with yeast mutants

31 March 2020

1 reference

Architecture of the yeast Rrp44 exosome complex suggests routes of RNA recruitment for 3' end processing

31 March 2020

1 reference

Poly(A) tail-dependent exonuclease AtRrp41p from Arabidopsis thaliana rescues 5.8 S rRNA processing and mRNA decay defects of the yeast ski6 mutant and is found in an exosome-sized complex in plant and yeast cells

31 March 2020

1 reference

Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts

31 March 2020

1 reference

Polynucleotide phosphorylase and the archaeal exosome as poly(A)-polymerases

31 March 2020

1 reference

Wrong PH for RNA degradation

31 March 2020

1 reference

Catalytic mechanism and assembly of the proteasome.

31 March 2020

1 reference

Proteasome active sites allosterically regulate each other, suggesting a cyclical bite-chew mechanism for protein breakdown

31 March 2020

1 reference

The caspase-like sites of proteasomes, their substrate specificity, new inhibitors and substrates, and allosteric interactions with the trypsin-like sites.

31 March 2020

1 reference

The sizes of peptides generated from protein by mammalian 26 and 20 S proteasomes. Implications for understanding the degradative mechanism and antigen presentation

31 March 2020

1 reference

Proteolysis, proteasomes and antigen presentation

31 March 2020

1 reference

Antigen processing and presentation by the class I major histocompatibility complex

31 March 2020

1 reference

MHC ligands and peptide motifs: first listing

31 March 2020

1 reference

The ubiquitin-proteasome pathway is required for processing the NF-kappa B1 precursor protein and the activation of NF-kappa B

31 March 2020

1 reference

Activation of a membrane-bound transcription factor by regulated ubiquitin/proteasome-dependent processing.

31 March 2020

1 reference

An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro

31 March 2020

1 reference

A conserved processing mechanism regulates the activity of transcription factors Cubitus interruptus and NF-κB

31 March 2020

1 reference

The 19S Regulatory Complex of the Proteasome Functions Independently of Proteolysis in Nucleotide Excision Repair

31 March 2020

1 reference

Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3.

31 March 2020

1 reference

The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators.

31 March 2020

1 reference

A nonproteolytic function of the 19S regulatory subunit of the 26S proteasome is required for efficient activated transcription by human RNA polymerase II.

31 March 2020

1 reference

Endonucleolytic RNA cleavage by a eukaryotic exosome

31 March 2020

1 reference

The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.

31 March 2020

1 reference

The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome

31 March 2020

1 reference

Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation

31 March 2020

1 reference

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases

31 March 2020

1 reference

Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.

31 March 2020

1 reference

The PMC2NT domain of the catalytic exosome subunit Rrp6p provides the interface for binding with its cofactor Rrp47p, a nucleic acid-binding protein

31 March 2020

1 reference

C1D and hMtr4p associate with the human exosome subunit PM/Scl-100 and are involved in pre-rRNA processing

31 March 2020

1 reference

Functions of the exosome in rRNA, snoRNA and snRNA synthesis

31 March 2020

1 reference

The RNA exosome targets the AID cytidine deaminase to both strands of transcribed duplex DNA substrates

31 March 2020

1 reference

The direction of protein entry into the proteasome determines the variety of products and depends on the force needed to unfold its two termini.

31 March 2020

1 reference

Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family

31 March 2020

1 reference

Evidence for core exosome independent function of the nuclear exoribonuclease Rrp6p

31 March 2020

1 reference

31 March 2020

1 reference

The pore of activated 20S proteasomes has an ordered 7-fold symmetric conformation

31 March 2020

1 reference

Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's alpha ring opens the gate for substrate entry

31 March 2020

1 reference

Structure of the proteasome activator REGalpha (PA28alpha)

31 March 2020

1 reference

Structural basis for the activation of 20S proteasomes by 11S regulators

31 March 2020

1 reference

The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions.

31 March 2020

1 reference

Structure of a Blm10 Complex Reveals Common Mechanisms for Proteasome Binding and Gate Opening

31 March 2020

1 reference

Endoproteolytic activity of the proteasome

31 March 2020

1 reference

The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo

31 March 2020

1 reference

Ski7p G protein interacts with the exosome and the Ski complex for 3'-to-5' mRNA decay in yeast

31 March 2020

1 reference

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

31 March 2020

1 reference

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

31 March 2020

1 reference

A new yeast poly(A) polymerase complex involved in RNA quality control

31 March 2020

1 reference

The yeast ski complex: crystal structure and RNA channeling to the exosome complex

31 March 2020

1 reference

Exosome-mediated recognition and degradation of mRNAs lacking a termination codon

31 March 2020

1 reference

The many pathways of RNA degradation

31 March 2020

1 reference

The nuclear RNA polymerase II surveillance system targets polymerase III transcripts

31 March 2020

1 reference

MPP6 is an exosome-associated RNA-binding protein involved in 5.8S rRNA maturation

31 March 2020

1 reference

Allosteric effects in the regulation of 26S proteasome activities

31 March 2020

1 reference

Transcriptome-wide analysis of exosome targets

31 March 2020

1 reference

Genome-wide approaches to systematically identify substrates of the ubiquitin-proteasome pathway

31 March 2020

1 reference

Proteasome inhibitors in cancer therapy

31 March 2020

1 reference

Proteasome inhibitors: an expanding army attacking a unique target

31 March 2020

1 reference

RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: a negative feedback circuit

31 March 2020

1 reference

Molecular mechanisms of proteasome assembly

31 March 2020

1 reference

The proteasome: from basic mechanisms to emerging roles

31 March 2020

1 reference

Widespread cotranslational formation of protein complexes.

31 March 2020

1 reference

Global analysis of protein expression in yeast

31 March 2020

1 reference

Evidence that pituitary cation-sensitive neutral endopeptidase is a multicatalytic protease complex

31 March 2020

1 reference

31 March 2020

Proteasome activators

1 reference

Blm3 is part of nascent proteasomes and is involved in a late stage of nuclear proteasome assembly

31 March 2020

1 reference

Structural and functional characterizations of the proteasome-activating protein PA26 from Trypanosoma brucei

31 March 2020

1 reference

PA200, a nuclear proteasome activator involved in DNA repair

31 March 2020

1 reference

Subcellular localization of proteasomes and their regulatory complexes in mammalian cells.

31 March 2020

1 reference

Peptide intermediates in the degradation of cellular proteins. Bestatin permits their accumulation in mouse liver in vivo

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23989960

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification, purification, and characterization of a protein activator (PA28) of the 20 S proteasome (macropain)

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23989960

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Purification of an 11 S regulator of the multicatalytic protease

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23989960

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRM3657

1 reference

Dimensions Publication ID

29 August 2017

1023748083

0 references

1 reference