(Q38291663)

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Molecular determinants of ligand specificity in family 11 carbohydrate binding modules: an NMR, X-ray crystallography and computational chemistry approach.

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6 January 2020

Molecular determinants of ligand specificity in family 11 carbohydrate binding modules: an NMR, X-ray crystallography and computational chemistry approach (English)

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6 January 2020

X-ray crystallography

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computational chemistry

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1

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6 January 2020

Natércia Brás

2

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6 January 2020

Nuno M. F. S. A. Cerqueira

3

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6 January 2020

Pedro Alexandrino Fernandes

4

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6 January 2020

Carlos M.G.A. Fontes

6

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6 January 2020

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6 January 2020

Maria João Romão

8

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6 January 2020

Ana Luísa Carvalho

9

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6 January 2020

10

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6 January 2020

Anjos L. Macedo

11

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6 January 2020

Eurico J. Cabrita

12

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6 January 2020

author name string

José A M Prates

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6 January 2020

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publication date

15 April 2008

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6 January 2020

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6 January 2020

275

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6 January 2020

10

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6 January 2020

2524-2535

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6 January 2020

Cellulase, clostridia, and ethanol

1 reference

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1 reference

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1 reference

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The crystal structure of the family 6 carbohydrate binding module from Cellvibrio mixtus endoglucanase 5a in complex with oligosaccharides reveals two distinct binding sites with different ligand specificities.

1 reference

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21 January 2018

Recent structural studies of carbohydrate-binding modules

1 reference

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21 January 2018

The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei

1 reference

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21 January 2018

The X6 "thermostabilizing" domains of xylanases are carbohydrate-binding modules: structure and biochemistry of the Clostridium thermocellum X6b domain

1 reference

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21 January 2018

Importance of hydrophobic and polar residues in ligand binding in the family 15 carbohydrate-binding module from Cellvibrio japonicus Xyn10C.

1 reference

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21 January 2018

Clostridium thermocellum Xyn10B carbohydrate-binding module 22-2: the role of conserved amino acids in ligand binding

1 reference

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21 January 2018

Recognition of cello-oligosaccharides by a family 17 carbohydrate-binding module: an X-ray crystallographic, thermodynamic and mutagenic study

1 reference

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21 January 2018

The family 11 carbohydrate-binding module of Clostridium thermocellum Lic26A-Cel5E accommodates beta-1,4- and beta-1,3-1,4-mixed linked glucans at a single binding site

1 reference

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21 January 2018

NMR spectroscopy techniques for screening and identifying ligand binding to protein receptors

1 reference

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21 January 2018

Interaction between cellohexaose and cellulose binding domains from Trichoderma reesei cellulases

1 reference

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21 January 2018

Differential oligosaccharide recognition by evolutionarily-related beta-1,4 and beta-1,3 glucan-binding modules

1 reference

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21 January 2018

On the importance of carbohydrate-aromatic interactions for the molecular recognition of oligosaccharides by proteins: NMR studies of the structure and binding affinity of AcAMP2-like peptides with non-natural naphthyl and fluoroaromatic residues.

1 reference

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21 January 2018

Molecular recognition of saccharides by proteins. Insights on the origin of the carbohydrate-aromatic interactions

1 reference

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21 January 2018

VMD: visual molecular dynamics

1 reference

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21 January 2018

Promiscuity in ligand-binding: The three-dimensional structure of a Piromyces carbohydrate-binding module, CBM29-2, in complex with cello- and mannohexaose

1 reference

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21 January 2018

Probing the mechanism of ligand recognition in family 29 carbohydrate-binding modules.

1 reference

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21 January 2018

The structural basis for the ligand specificity of family 2 carbohydrate-binding modules

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2008.06401.X

21 January 2018

Development and validation of a genetic algorithm for flexible docking

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21 January 2018

Improved protein-ligand docking using GOLD

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21 January 2018

Solvent interactions determine carbohydrate conformation

1 reference

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21 January 2018

Solvated ensemble averaging in the calculation of partial atomic charges

1 reference

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21 January 2018

Quantum mechanical study of the nonbonded forces in water-methanol complexes

1 reference

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A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

1 reference

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Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

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Langevin dynamics of peptides: the frictional dependence of isomerization rates of N-acetylalanyl-N'-methylamide

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21 January 2018

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