(Q38318355)

2 September 2017

title

Mapping of heparin/heparan sulfate binding sites on αvβ3 integrin by molecular docking (English)

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2 September 2017

1

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2 September 2017

4

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2 September 2017

Emilie Chautard

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Sylvie Ricard-Blum

series ordinal

5

object named as

Sylvie Ricard-Blum

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2 September 2017

Nicolas Sapay

2

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2 September 2017

publication date

1 February 2013

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Journal of Molecular Recognition

2 September 2017

published in

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2 September 2017

volume

26

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2 September 2017

issue

2

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2 September 2017

page(s)

76-85

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Three-dimensional EM structure of the ectodomain of integrin {alpha}V{beta}3 in a complex with fibronectin

2 September 2017

cites work

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Linking integrin conformation to function

21 January 2018

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Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism

21 January 2018

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The syndecan-1 ectodomain regulates alphavbeta3 integrin activity in human mammary carcinoma cells

21 January 2018

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21 January 2018

The Protein Data Bank

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The molecular diversity of glycosaminoglycans shapes animal development.

21 January 2018

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Crystal structure of thrombin bound to heparin

21 January 2018

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Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

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Heparin is an adhesive ligand for the leukocyte integrin Mac-1 (CD11b/CD1).

21 January 2018

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Molecular interplay between endostatin, integrins, and heparan sulfate.

21 January 2018

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Computational approaches to the identification of heparin-binding sites on the surfaces of proteins

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The structure of glycosaminoglycans and their interactions with proteins.

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Platelet endothelial cell adhesion molecule 1 (PECAM-1) and its interactions with glycosaminoglycans: 1. Molecular modeling studies

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Comparison of multiple Amber force fields and development of improved protein backbone parameters

21 January 2018

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Cell-matrix adhesion in vascular development

21 January 2018

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Structural view of glycosaminoglycan-protein interactions

21 January 2018

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Semi-rigid solution structures of heparin by constrained X-ray scattering modelling: new insight into heparin-protein complexes

21 January 2018

1 reference

The solution structure of heparan sulfate differs from that of heparin: implications for function.

21 January 2018

1 reference

GLYCAM06: a generalizable biomolecular force field. Carbohydrates

21 January 2018

1 reference

Crystal structures of NK1-heparin complexes reveal the basis for NK1 activity and enable engineering of potent agonists of the MET receptor.

21 January 2018

1 reference

Structural diversity of heparan sulfate binding domains in chemokines

21 January 2018

1 reference

Characterization of the interaction between tumor necrosis factor-stimulated gene-6 and heparin: implications for the inhibition of plasmin in extracellular matrix microenvironments.

21 January 2018

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Mechanisms of integrin activation and trafficking

21 January 2018

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AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

21 January 2018

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N.m.r. and molecular-modelling studies of the solution conformation of heparin

21 January 2018

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Structural and Functional Basis of CXCL12 (Stromal Cell-derived Factor-1 ) Binding to Heparin

21 January 2018

1 reference

Crystal structure of α5β1 integrin ectodomain: Atomic details of the fibronectin receptor

21 January 2018

1 reference

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 January 2018

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Scalable molecular dynamics with NAMD

21 January 2018

1 reference

Finding a needle in a haystack: development of a combinatorial virtual screening approach for identifying high specificity heparin/heparan sulfate sequence(s).

21 January 2018

1 reference

Interaction of endostatin with integrins implicated in angiogenesis

21 January 2018

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Matricryptins derived from collagens and proteoglycans

21 January 2018

1 reference

Characterization of endostatin binding to heparin and heparan sulfate by surface plasmon resonance and molecular modeling: role of divalent cations

21 January 2018

1 reference

MultiSeq: unifying sequence and structure data for evolutionary analysis

21 January 2018

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Characterization of the stromal cell-derived factor-1alpha-heparin complex

21 January 2018

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Molecular modeling of the interaction between heparan sulfate and cellular growth factors: bringing pieces together.

21 January 2018

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Simulation of carbohydrates, from molecular docking to dynamics in water

21 January 2018

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Crystal structure of a ternary FGF-FGFR-heparin complex reveals a dual role for heparin in FGFR binding and dimerization

21 January 2018

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Reorganizing the protein space at the Universal Protein Resource (UniProt)

21 January 2018

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Exposure of acidic residues as a danger signal for recognition of fibrinogen and other macromolecules by integrin alphaXbeta2

21 January 2018

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Binding between the integrin alphaXbeta2 (CD11c/CD18) and heparin

21 January 2018

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Crystal structure of the extracellular segment of integrin alpha Vbeta3

21 January 2018

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Crystal structure of the extracellular segment of integrin alpha Vbeta3 in complex with an Arg-Gly-Asp ligand

21 January 2018

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Heparin modulates the conformation and signaling of platelet integrin αIIbβ3

21 January 2018

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Crystal structures of aprotinin and its complex with sucrose octasulfate reveal multiple modes of interactions with implications for heparin binding

21 January 2018

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Docking of Glycosaminoglycans to Heparin-Binding Proteins: Validation for aFGF, bFGF, and Antithrombin and Application to IL-8

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/JMR.2250

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2 September 2017

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