(Q38320906)

2 September 2017

title

Escherichia coli RNA polymerase contacts outside the -10 promoter element are not essential for promoter melting (English)

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2 September 2017

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Anita Niedziela-Majka

series ordinal

1

object named as

Anita Niedziela-Majka

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2 September 2017

Tomasz Heyduk

2

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2 September 2017

language of work or name

English

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publication date

15 September 2005

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Journal of Biological Chemistry

2 September 2017

published in

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2 September 2017

volume

280

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2 September 2017

issue

46

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2 September 2017

page(s)

38219-38227

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Mechanism and control of transcription initiation in prokaryotes

2 September 2017

cites work

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

21 January 2018

Bacterial RNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Structure and function of bacterial sigma factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Sigma domain structure: one down, one to go.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Polypeptides containing highly conserved regions of transcription initiation factor σ70 exhibit specificity of binding to promoter DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

sigma factor mutations affecting the sequence-selective interaction of RNA polymerase with -10 region single-stranded DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Promoter opening via a DNA fork junction binding activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

A fork junction DNA-protein switch that controls promoter melting by the bacterial enhancer-dependent sigma factor

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Escherichia coli promoter opening and -10 recognition: mutational analysis of sigma70.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Function of the bacterial TATAAT -10 element as single-stranded DNA during RNA polymerase isomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Effect of DNA bases and backbone on sigma70 holoenzyme binding and isomerization using fork junction probes

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Roles for inhibitory interactions in the use of the -10 promoter element by sigma 70 holoenzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Open complex formation in vitro by sigma38 (rpoS) RNA polymerase: roles for region 2 amino acids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

RNA polymerase alters the mobility of an A-residue crucial to polymerase-induced melting of promoter DNA.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Interaction of RNA polymerase with forked DNA: evidence for two kinetically significant intermediates on the pathway to the final complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Protein-nucleic acid interactions during open complex formation investigated by systematic alteration of the protein and DNA binding partners

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Structural organization of the RNA polymerase-promoter open complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Minimal machinery of RNA polymerase holoenzyme sufficient for promoter melting

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Architecture of a complex between the sigma70 subunit of Escherichia coli RNA polymerase and the nontemplate strand oligonucleotide. Luminescence resonance energy transfer study

21 January 2018

1 reference

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Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Three-dimensional structure of E. coli core RNA polymerase: promoter binding and elongation conformations of the enzyme.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M507984200

Use of Mono Q high-resolution ion-exchange chromatography to obtain highly pure and active Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Conformation of fork junction DNA in a complex with Escherichia coli RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

HO. and DNase I probing of E sigma 70 RNA polymerase--lambda PR promoter open complexes: Mg2+ binding and its structural consequences at the transcription start site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Luminescence resonance energy transfer analysis of RNA polymerase complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

An RNA polymerase mutant deficient in DNA melting facilitates study of activation mechanism: application to an artificial activator of transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Conformational flexibility of bacterial RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M507984200

21 January 2018

Identifiers

DOI

10.1074/JBC.M507984200

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2 September 2017

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