(Q38327247)

2 September 2017

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis (English)

1 reference

2 September 2017

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Bacillus subtilis

1 reference

41

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2 September 2017

43

Jörg Stülke

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Edda Klipp

26

Edda Klipp

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Tatiana Rochat

Tatiana Rochat

4

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Emma L Denham

Emma L Denham

16

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Mark J Fogg

Mark J Fogg

17

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Leif Steil

Leif Steil

42

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Wolfram Liebermeister

Wolfram Liebermeister

30

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Colin R. Harwood

Colin R Harwood

22

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Tony Wilkinson

Anthony J Wilkinson

46

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Uwe Völker

Uwe Völker

49

0 references

Michael Hecker

48

Michael Hecker

1 reference

2 September 2017

Pierre Nicolas

1

1 reference

2 September 2017

Ulrike Mäder

2

1 reference

2 September 2017

Etienne Dervyn

3

1 reference

2 September 2017

Aurélie Leduc

5

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2 September 2017

Nathalie Pigeonneau

6

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2 September 2017

Elena Bidnenko

7

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2 September 2017

Elodie Marchadier

8

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2 September 2017

Mark Hoebeke

9

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2 September 2017

Stéphane Aymerich

10

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2 September 2017

Dörte Becher

11

1 reference

2 September 2017

Paola Bisicchia

12

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2 September 2017

Eric Botella

13

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2 September 2017

Olivier Delumeau

14

1 reference

2 September 2017

Geoff Doherty

15

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2 September 2017

Vincent Fromion

18

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2 September 2017

Anne Goelzer

19

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2 September 2017

Annette Hansen

20

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2 September 2017

Elisabeth Härtig

21

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2 September 2017

Georg Homuth

23

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2 September 2017

Hanne Jarmer

24

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2 September 2017

Matthieu Jules

25

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2 September 2017

Ludovic Le Chat

27

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2 September 2017

François Lecointe

28

1 reference

2 September 2017

Peter Lewis

29

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2 September 2017

Anika March

31

1 reference

2 September 2017

Ruben A T Mars

32

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2 September 2017

Priyanka Nannapaneni

33

1 reference

2 September 2017

David Noone

34

1 reference

2 September 2017

Susanne Pohl

35

1 reference

2 September 2017

Bernd Rinn

36

1 reference

2 September 2017

Frank Rügheimer

37

1 reference

2 September 2017

Praveen K Sappa

38

1 reference

2 September 2017

Franck Samson

39

1 reference

2 September 2017

Marc Schaffer

40

1 reference

2 September 2017

Thomas Wiegert

44

1 reference

2 September 2017

Kevin M Devine

45

1 reference

2 September 2017

Jan Maarten van Dijl

47

1 reference

2 September 2017

Philippe Bessières

50

1 reference

2 September 2017

Philippe Noirot

51

1 reference

2 September 2017

language of work or name

English

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publication date

1 March 2012

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2 September 2017

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2 September 2017

335

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2 September 2017

1103-1106

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2 September 2017

6072

1 reference

The transcription unit architecture of the Escherichia coli genome

2 September 2017

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Transcriptome Complexity in a Genome-Reduced Bacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The primary transcriptome of the major human pathogen Helicobacter pylori

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The Listeria transcriptional landscape from saprophytism to virulence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A single-base resolution map of an archaeal transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The transcriptionally active regions in the genome of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Transcriptional landscape estimation from tiling array data using a model of signal shift and drift

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Essential Bacillus subtilis genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Identification of regulatory RNAs in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Bacterial antisense RNAs: how many are there, and what are they doing?

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Identification of a putative Bacillus subtilis rho gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Compilation and analysis of Bacillus subtilis sigma A-dependent promoter sequences: evidence for extended contact between RNA polymerase and upstream promoter DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The extracytoplasmic function (ECF) sigma factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The structural basis for promoter -35 element recognition by the group IV sigma factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A NusE:NusG complex links transcription and translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Cooperation between translating ribosomes and RNA polymerase in transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

MuGeN: simultaneous exploration of multiple genomes and computer analysis results

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A genome-wide survey of short coding sequences in streptococci.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Mapping of genes determining nonpermissiveness and host-specific restriction to bacteriophages in Bacillus subtilis Marburg

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Plasmids designed to alter the antibiotic resistance expressed by insertion mutations in Bacillus subtilis, through in vivo recombination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A study of the relationships between oligonucleotide properties and hybridization signal intensities from NimbleGen microarray datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Mauve: multiple alignment of conserved genomic sequence with rearrangements

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Co-expression pattern from DNA microarray experiments as a tool for operon prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Mining Bacillus subtilis chromosome heterogeneities using hidden Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Expression of the pgsB encoding the poly-gamma-DL-glutamate synthetase of Bacillus subtilis (natto).

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Dual role of the PhoP approximately P response regulator: Bacillus amyloliquefaciens FZB45 phytase gene transcription is directed by positive and negative interactions with the phyC promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Implication of CcpN in the regulation of a novel untranslated RNA (SR1) in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A dual-function sRNA from B. subtilis: SR1 acts as a peptide encoding mRNA on the gapA operon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Small untranslated RNA antitoxin in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Rfam: updates to the RNA families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Genome Reviews: standardizing content and representation of information about complete genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Prediction of rho-independent Escherichia coli transcription terminators. A statistical analysis of their RNA stem-loop structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Regulator trafficking on bacterial transcription units in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Small subunits of RNA polymerase: localization, levels and implications for core enzyme composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

An allosteric mechanism of Rho-dependent transcription termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Global characterization of disulfide stress in Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Correlating two viral load assays with known detection limits

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Reversible jump Markov chain Monte Carlo computation and Bayesian model determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A reversible jump Markov chain Monte Carlo algorithm for bacterial promoter motifs discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

RNA polymerase trafficking in Bacillus subtilis cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Extracytoplasmic function sigma factors with overlapping promoter specificity regulate sublancin production in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Regulation by transcription factors in bacteria: beyond description

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The regulation of bacterial transcription initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A novel regulatory protein governing biofilm formation in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

AbrB modulates expression and catabolite repression of a Bacillus subtilis ribose transport operon

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Transcriptome and proteome analysis of Bacillus subtilis gene expression in response to superoxide and peroxide stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Staphylococcus aureus haem oxygenases are differentially regulated by iron and haem.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Bacillus anthracis IsdG, a heme-degrading monooxygenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The Fnr regulon of Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Global transcriptional response of Bacillus subtilis to heat shock

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Global analysis of the general stress response of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Genome-wide analysis of the general stress response in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

DNA uptake during bacterial transformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Stochastic switching to competence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Generation of multiple cell types in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Controlling competence in Bacillus subtilis: shared use of regulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Improved tools for biological sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Advances in bacterial promoter recognition and its control by factors that do not bind DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Regulatory mechanisms employed by cis-encoded antisense RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Quantitation of ColE1-encoded replication elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

The Bacillus subtilis ydcDE operon encodes an endoribonuclease of the MazF/PemK family and its inhibitor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

An antisense RNA that governs the expression kinetics of a multifunctional virulence gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

A cis-encoded antisense small RNA regulated by the HP0165-HP0166 two-component system controls expression of ureB in Helicobacter pylori

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Bacillus subtilis ilvB operon: an intersection of global regulons

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Transcriptional organization and posttranscriptional regulation of the Bacillus subtilis branched-chain amino acid biosynthesis genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

GadY, a small-RNA regulator of acid response genes in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Identification of a furA cis antisense RNA in the cyanobacterium Anabaena sp. PCC 7120.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

Experimental identification and characterization of 97 novel npcRNA candidates in Salmonella enterica serovar Typhi

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1206848

21 January 2018

Identifiers

DOI

10.1126/SCIENCE.1206848

1 reference

2 September 2017

1 reference