(Q38330582)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22053085%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

Conformational dynamics of the tetracycline-binding aptamer (English)

1 reference

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15 January 2020

1 reference

2

1 reference

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15 January 2020

Josef Wachtveitl

series ordinal

5

1 reference

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15 January 2020

4

Beatrix Suess

1 reference

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15 January 2020

author name string

Ute Förster

series ordinal

1

1 reference

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15 January 2020

Peter Trojanowski

series ordinal

3

1 reference

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15 January 2020

language of work or name

English

0 references

publication date

3 November 2011

1 reference

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15 January 2020

published in

Nucleic Acids Research

1 reference

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15 January 2020

volume

40

1 reference

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15 January 2020

issue

4

1 reference

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15 January 2020

page(s)

1807-1817

1 reference

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Creative Commons Attribution-NonCommercial 3.0 Unported

15 January 2020

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Ligand-induced conformational capture of a synthetic tetracycline riboswitch revealed by pulse EPR.

1 reference

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Fast and ultrafast spectroscopic investigation of tetracycline derivatives in organic and aqueous media.

6 September 2017

1 reference

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Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch

6 September 2017

1 reference

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Folding of a transcriptionally acting preQ1 riboswitch

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Ultrafast dynamics show that the theophylline and 3-methylxanthine aptamers employ a conformational capture mechanism for binding their ligands

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

A fast and efficient translational control system for conditional expression of yeast genes

6 September 2017

1 reference

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NMR chemical exchange as a probe for ligand-binding kinetics in a theophylline-binding RNA aptamer.

6 September 2017

1 reference

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Structural Basis for Specific, High-Affinity Tetracycline Binding by an In Vitro Evolved Aptamer and Artificial Riboswitch

6 September 2017

1 reference

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RNA dynamics: it is about time.

6 September 2017

1 reference

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Time-resolved NMR methods resolving ligand-induced RNA folding at atomic resolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Tetracycline aptamer-controlled regulation of pre-mRNA splicing in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Interplay of 'induced fit' and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Folding of the adenine riboswitch

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Thermodynamic characterization of an engineered tetracycline-binding riboswitch

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Tetracycline-aptamer-mediated translational regulation in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Conditional gene expression by controlling translation with tetracycline-binding aptamers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Role of a heterogeneous free state in the formation of a specific RNA-theophylline complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

A tetracycline-binding RNA aptamer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Program DYNAFIT for the analysis of enzyme kinetic data: application to HIV proteinase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Stopped-flow fluorescence and steady-state kinetic studies of ligand-binding reactions of glucoamylase from Aspergillus niger

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

A stopped flow transient kinetic analysis of substrate binding and catalysis in Escherichia coli D-3-phosphoglycerate dehydrogenase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Molecular analysis of a synthetic tetracycline-binding riboswitch

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Tyrosine 162 of the photosynthetic reaction center L-subunit plays a critical role in the cytochrome c2 mediated rereduction of the photooxidized bacteriochlorophyll dimer in Rhodobacter sphaeroides. 2. Quantitative kinetic analysis.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

DynaFit--a software package for enzymology.

23 June 2018

1 reference

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Screening for engineered neomycin riboswitches that control translation initiation.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Ligand-induced folding of the thiM TPP riboswitch investigated by a structure-based fluorescence spectroscopic approach.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

The kinetics of ligand binding by an adenine-sensing riboswitch

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Fluorescence kinetics of aqueous solutions of tetracycline and its complexes with Mg2+ and Ca2+.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287181

Determination of the equilibrium association constant between tet repressor and tetracycline at limiting Mg2+ concentrations: A generally applicable method for effector-dependent high-affinity complexes

3 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22053085

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKR835

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22053085%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22053085%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

22053085

1 reference