(Q38339601)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

title

Two modes of HIV-1 polypurine tract cleavage are affected by introducing locked nucleic acid analogs into the (-) DNA template (English)

1 reference

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30 December 2019

1

1 reference

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30 December 2019

author name string

Hye-Young Yi-Brunozzi

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

Stuart F J Le Grice

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

language of work or name

English

0 references

publication date

25 June 2004

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

30 December 2019

number of pages

8

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

volume

279

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

issue

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

page(s)

37095-37102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA

30 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Alterations to the primer grip of p66 HIV-1 reverse transcriptase and their consequences for template-primer utilization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Alanine-scanning mutations in the "primer grip" of p66 HIV-1 reverse transcriptase result in selective loss of RNA priming activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Reduced frameshift fidelity and processivity of HIV-1 reverse transcriptase mutants containing alanine substitutions in helix H of the thumb subdomain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Altering the RNase H primer grip of human immunodeficiency virus reverse transcriptase modifies cleavage specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Mutation of amino acids in the connection domain of human immunodeficiency virus type 1 reverse transcriptase that contact the template-primer affects RNase H activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

HIV-1 Reverse Transcription A Termination Step at the Center of the Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Plus-strand priming by Moloney murine leukemia virus. The sequence features important for cleavage by RNase H.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Interaction of HIV-1 ribonuclease H with polypurine tract containing RNA-DNA hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Analysis of plus-strand primer selection, removal, and reutilization by retroviral reverse transcriptases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Mutations of the RNase H C helix of the Moloney murine leukemia virus reverse transcriptase reveal defects in polypurine tract recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Specific Cleavages by RNase H Facilitate Initiation of Plus-Strand RNA Synthesis by Moloney Murine Leukemia Virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

The solution structure of the r(gcg)d(TATACCC):d(GGGTATACGC) Okazaki fragment contains two distinct duplex morphologies connected by a junction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

DNA duplexes flanked by hybrid duplexes: the solution structure of chimeric junctions in [r(cgcg)d(TATACGCG)]2

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

The structure of an RNA/DNA hybrid: a substrate of the ribonuclease activity of HIV-1 reverse transcriptase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Structure of a DNA analog of the primer for HIV-1 RT second strand synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Solution structure of r(gaggacug):d(CAGTCCTC) hybrid: implications for the initiation of HIV-1 (+)-strand synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Pre-existing distortions in nucleic acid structure aid polypurine tract selection by HIV-1 reverse transcriptase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Hydrogen bonding, base stacking, and steric effects in dna replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Active site tightness and substrate fit in DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Hydrolysis of RNA/DNA hybrids containing nonpolar pyrimidine isosteres defines regions essential for HIV type 1 polypurine tract selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Using pyrrolo-deoxycytosine to probe RNA/DNA hybrids containing the human immunodeficiency virus type-1 3' polypurine tract.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Nonpolar thymine isosteres in the Ty3 polypurine tract DNA template modulate processing and provide a model for its recognition by Ty3 reverse transcriptase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

LNA and alpha-L-LNA: towards therapeutic applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Locked nucleic acid (LNA) recognition of RNA: NMR solution structures of LNA:RNA hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Identification of a sequence element immediately upstream of the polypurine tract that is essential for replication of simian immunodeficiency virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Deletion of a short, untranslated region adjacent to the polypurine tract in Moloney murine leukemia virus leads to formation of aberrant 5' plus-strand DNA ends in vivo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Purification and characterization of human immunodeficiency virus type 1 reverse transcriptase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Mutations in the 5′ End of the Human Immunodeficiency Virus Type 1 Polypurine Tract Affect RNase H Cleavage Specificity and Virus Titer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Evidence from CD spectra that d(purine).r(pyrimidine) and r(purine).d(pyrimidine) hybrids are in different structural classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Locked nucleic acid (LNA): fine-tuning the recognition of DNA and RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

LNA: a versatile tool for therapeutics and genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

alpha-L-LNA (alpha-L-ribo configured locked nucleic acid) recognition of DNA: an NMR spectroscopic study

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

Structural characterization of a DNA duplex modeled on a DNA:RNA hybrid of the polypurine tract recognized by a reverse transcriptase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M403306200

21 January 2018

Identifiers

DOI

10.1074/JBC.M403306200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15220330%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

1 reference