(Q38350987)

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Determination of the catalytic parameters of the N-terminal half of Escherichia coli ribonuclease E and the identification of critical functional groups in RNA substrates

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Europe PubMed Central

PubMed publication ID

2 September 2017

Determination of the catalytic parameters of the N-terminal half of Escherichia coli ribonuclease E and the identification of critical functional groups in RNA substrates (English)

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Europe PubMed Central

PubMed publication ID

2 September 2017

Escherichia coli

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Kenneth J McDowall

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Kenneth J McDowall

6

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author name string

Yulia Redko

1

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Europe PubMed Central

PubMed publication ID

2 September 2017

Mark R Tock

2

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Europe PubMed Central

PubMed publication ID

2 September 2017

Chris J Adams

3

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Europe PubMed Central

PubMed publication ID

2 September 2017

Vladimir R Kaberdin

4

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Europe PubMed Central

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2 September 2017

Jane A Grasby

5

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2 September 2017

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publication date

27 August 2003

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Europe PubMed Central

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2 September 2017

Journal of Biological Chemistry

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Europe PubMed Central

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2 September 2017

278

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Europe PubMed Central

PubMed publication ID

2 September 2017

45

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Europe PubMed Central

PubMed publication ID

2 September 2017

44001-44008

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Messenger RNA stability and its role in control of gene expression in bacteria and phages

1 reference

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RNA components of Escherichia coli degradosome: evidence for rRNA decay

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RNase G (CafA protein) and RNase E are both required for the 5' maturation of 16S ribosomal RNA.

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The N-terminal domain of the rne gene product has RNase E activity and is non-overlapping with the arginine-rich RNA-binding site

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Evidence for an RNA binding region in the Escherichia coli processing endoribonuclease RNase E.

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The endoribonucleolytic N-terminal half of Escherichia coli RNase E is evolutionarily conserved in Synechocystis sp. and other bacteria but not the C-terminal half, which is sufficient for degradosome assembly

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Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome

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Proteins associated with RNase E in a multicomponent ribonucleolytic complex

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Ribonuclease E is a 5'-end-dependent endonuclease

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The CafA protein required for the 5'-maturation of 16 S rRNA is a 5'-end-dependent ribonuclease that has context-dependent broad sequence specificity.

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The phylogenetic distribution of bacterial ribonucleases.

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Site-specific RNase E cleavage of oligonucleotides and inhibition by stem-loops

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Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site.

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Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

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T7 RNA polymerase can direct expression of influenza virus cap-binding protein (PB2) in Escherichia coli

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Use of T7 RNA polymerase to direct expression of cloned genes

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Characterization of the ColE1 primer-RNA1 complex: analysis of a domain of ColE1 RNA1 necessary for its interaction with primer RNA.

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Cleavage of poly(A) tails on the 3'-end of RNA by ribonuclease E of Escherichia coli

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DNA cleavage by the EcoRV restriction endonuclease: roles of divalent metal ions in specificity and catalysis

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Interaction of the restriction endonuclease EcoRV with the deoxyguanosine and deoxycytidine bases in its recognition sequence

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Role of cysteine residues in ribonuclease H from Escherichia coli. Site-directed mutagenesis and chemical modification

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Nucleoside conformation is determined by the electronegativity of the sugar substituent.

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The catalytic domain of RNase E shows inherent 3' to 5' directionality in cleavage site selection

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RNA footprinting analysis using ion pair reverse phase liquid chromatography

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Metal chelate affinity chromatography, a new approach to protein fractionation

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Consequences of RNase E scarcity in Escherichia coli.

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RNase G complementation of rne null mutation identifies functional interrelationships with RNase E in Escherichia coli

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Activation/attenuation model for RNase H. A one-metal mechanism with second-metal inhibition.

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Probing the substrate specificity of Escherichia coli RNase E using a novel oligonucleotide-based assay

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Poly(A)- and poly(U)-specific RNA 3' tail shortening by E. coli ribonuclease E.

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The Structure of a Transcriptional Unit on Colicin E1 Plasmid

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RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli

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Analysis of mRNA decay and rRNA processing in Escherichia coli in the absence of RNase E-based degradosome assembly

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Identifiers

10.1074/JBC.M306760200

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

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