(Q38360406)

English

A new, expressed multigene family containing a hot spot for insertion of retroelements is associated with polymorphic subtelomeric regions of Trypanosoma brucei

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

A new, expressed multigene family containing a hot spot for insertion of retroelements is associated with polymorphic subtelomeric regions of Trypanosoma brucei (English)

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Trypanosoma brucei

0 references

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 1 (RHS1), putative

1 reference

5 February 2019

retrotransposon hot spot protein 1 (RHS1), putative

1 reference

5 February 2019

retrotransposon hot spot protein 5 (RHS5), putative

1 reference

5 February 2019

retrotransposon hot spot protein 1 (RHS1), putative

1 reference

5 February 2019

retrotransposon hot spot protein 5 (RHS5), putative

1 reference

5 February 2019

retrotransposon hot spot protein 2 (RHS2), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 1 (RHS1), putative

1 reference

5 February 2019

retrotransposon hot spot protein 2 (RHS2), putative

1 reference

5 February 2019

retrotransposon hot spot protein 2 (RHS2), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

retrotransposon hot spot protein 5 (RHS5), putative

1 reference

5 February 2019

retrotransposon hot spot protein 5 (RHS5), putative

1 reference

5 February 2019

retrotransposon hot spot protein 3 (RHS3), putative

1 reference

5 February 2019

retrotransposon hot spot protein 4 (RHS4), putative

1 reference

5 February 2019

8

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

object named as

Najib M El-Sayed

5

0 references

Matthew Berriman

7

object named as

Matthew Berriman

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

author name string

Frederic Bringaud

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Nicolas Biteau

2

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Sara E Melville

3

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Stéphanie Hez

4

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Vanessa Leech

6

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

John E Donelson

9

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Théo Baltz

10

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

1 February 2002

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Eukaryotic Cell

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

137-151

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Antigenic variation in trypanosomes: enhanced phenotypic variation in a eukaryotic parasite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

An update on antigenic variation in African trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

The VSG expression sites of Trypanosoma brucei: multipurpose tools for the adaptation of the parasite to mammalian hosts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Analysis of a donor gene region for a variant surface glycoprotein and its expression site in African trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

A superfamily of variant genes encoded in the subtelomeric region of Plasmodium vivax

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

A random sequencing approach for the analysis of the Trypanosoma cruzi genome: general structure, large gene and repetitive DNA families, and gene discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Interspersed repeats and other mementos of transposable elements in mammalian genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

LINEs, SINEs and repetitive DNA: non-LTR retrotransposons in plant genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

A novel pseudoautosomal human gene encodes a putative protein similar to Ac-like transposases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Generation of expressed sequence tags as physical landmarks in the genome of Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Conserved organization of genes in trypanosomatids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Functional and molecular characterization of a glycosomal PPi-dependent enzyme in trypanosomatids: pyruvate, phosphate dikinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

The open reading frame 1 of the L1Tc retrotransposon of Trypanosoma cruzi codes for a protein with apurinic-apyrimidinic nuclease activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

cDNA expressed sequence tags of Trypanosoma brucei rhodesiense provide new insights into the biology of the parasite.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

R4, a non-LTR retrotransposon specific to the large subunit rRNA genes of nematodes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Expression of a retroposon-like sequence upstream of the putative Trypanosoma brucei variant surface glycoprotein gene expression site promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

A new non-LTR retrotransposon provides evidence for multiple distinct site-specific elements in Crithidia fasciculata miniexon arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

The large diverse gene family var encodes proteins involved in cytoadherence and antigenic variation of plasmodium falciparum-infected erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Cloning the P. falciparum gene encoding PfEMP1, a malarial variant antigen and adherence receptor on the surface of parasitized human erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Ingi, a 5.2-kb dispersed sequence element from Trypanosoma brucei that carries half of a smaller mobile element at either end and has homology with mammalian LINEs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

The genes and transcripts of an antigen gene expression site from T. brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Chromosome organization of the protozoan Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

A rapidly rearranging retrotransposon within the miniexon gene locus of Crithidia fasciculata

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Chromosome structure: DNA nucleotide sequence elements of a subset of the minichromosomes of the protozoan Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Genomic organization and context of a trypanosome variant surface glycoprotein gene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Distinct families of site-specific retrotransposons occupy identical positions in the rRNA genes of Anopheles gambiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Short communication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

6 September 2017

c2X75, a derivative of the cosmid vector c2XB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

14 September 2017

A new member of a family of site-specific retrotransposons is present in the spliced leader RNA genes of Trypanosoma cruzi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

14 September 2017

The chromosome ends of Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

27 September 2017

Multiple copies of a retroposon interrupt spliced leader RNA genes in the African trypanosome, Trypanosoma gambiense

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

27 September 2017

Conservation of metacyclic variant surface glycoprotein expression sites among different trypanosome isolates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

stevor and rif are Plasmodium falciparum multicopy gene families which potentially encode variant antigens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

VSG gene control and infectivity strategy of metacyclic stage Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Regulation of vsg expression site transcription and switching in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Control of VSG gene expression sites in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Multiple mechanisms of immune evasion by African trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Expression and function of surface proteins in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Transposable element-host interactions: regulation of insertion and excision

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

The DNA structures at the ends of eukaryotic chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Point mutations are associated with a gene duplication leading to the bloodstream reexpression of a trypanosome metacyclic VSG.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Transposons in place of telomeric repeats at a Drosophila telomere

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Epileptic seizures caused by inactivation of a novel gene, jerky, related to centromere binding protein-B in transgenic mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Isolation of salivarian trypanosomes from man and other mammals using DEAE-cellulose.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

Trypanosoma brucei repeated element with unusual structural and transcriptional properties

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

A retroposon in the 5' flank of a Trypanosoma brucei VSG gene lacks insertional terminal repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

A potential hexose transporter gene expressed predominantly in the bloodstream form of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

23 June 2018

The molecular karyotype of the megabase chromosomes of Trypanosoma brucei stock 427.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

Analysis of ploidy (in megabase chromosomes) in Trypanosoma brucei after genetic exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

Multiple causes of size variation in the diploid megabase chromosomes of African tyrpanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

The anatomy and transcription of a monocistronic expression site for a metacyclic variant surface glycoprotein gene in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

Parasite genome analysis. Genome research in Trypanosoma brucei: chromosome size polymorphism and its relevance to genome mapping and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

Complete nucleotide sequence of an unusual mobile element from trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

The anatomy and transcription of a telomeric expression site for variant-specific surface antigens in T. brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=118050

31 August 2018

Wide variation in DNA content among isolates of Trypanosoma brucei ssp

1 reference

https://pubmed.ncbi.nlm.nih.gov/12455980

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The molecular karyotype of the megabase chromosomes of Trypanosoma brucei and the assignment of chromosome markers

1 reference

https://pubmed.ncbi.nlm.nih.gov/12455980

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic clustering of the Trypanosoma cruzi nonlong terminal L1Tc retrotransposon with defined interspersed repeated DNA elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/12455980

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA-binding fingers encoded by a trypanosome retroposon

1 reference

https://pubmed.ncbi.nlm.nih.gov/12455980

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of trypanosome surface glycoprotein genes involves a duplication-transposition leading to an altered 3' end

1 reference

https://pubmed.ncbi.nlm.nih.gov/12455980

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/EC.1.1.137-151.2002

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

ResearchGate publication ID

0 references

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