(Q38457045)

English

Control of directionality in integrase-mediated recombination: examination of recombination directionality factors (RDFs) including Xis and Cox proteins

scientific article published on June 2001

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

Control of directionality in integrase-mediated recombination: examination of recombination directionality factors (RDFs) including Xis and Cox proteins (English)

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

2

object named as

G F Hatfull

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

author name string

J A Lewis

1

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

language of work or name

0 references

publication date

1 June 2001

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

number of pages

12

1 reference

based on heuristic

inferred from page(s)

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

29

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

11

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

2205-2216

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

DNA sequence and comparison of virulence plasmids from Rhodococcus equi ATCC 33701 and 103

1 reference

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Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3

1 reference

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6 September 2017

Characterization of a novel integrative element, ICESt1, in the lactic acid bacterium Streptococcus thermophilus

1 reference

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Genome Sequence of the Radioresistant Bacterium Deinococcus radiodurans R1

1 reference

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6 September 2017

Sequence and organization of pXO1, the large Bacillus anthracis plasmid harboring the anthrax toxin genes

1 reference

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6 September 2017

The 102-kilobase pgm locus of Yersinia pestis: sequence analysis and comparison of selected regions among different Yersinia pestis and Yersinia pseudotuberculosis strains

1 reference

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Characterization of the major control region of Vibrio cholerae bacteriophage K139: immunity, exclusion, and integration.

1 reference

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6 September 2017

Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

1 reference

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6 September 2017

Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199.

1 reference

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6 September 2017

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

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In vitro site-specific integration of bacteriophage DNA catalyzed by a recombinase of the resolvase/invertase family

1 reference

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6 September 2017

Integration specificities of two lambdoid phages (21 and e14) that insert at the same attB site

1 reference

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6 September 2017

The complete genome sequence of Escherichia coli K-12

1 reference

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The integrase family of tyrosine recombinases: evolution of a conserved active site domain

1 reference

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6 September 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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6 September 2017

Bacteriophage T12 of Streptococcus pyogenes integrates into the gene encoding a serine tRNA.

1 reference

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6 September 2017

Extracting protein alignment models from the sequence database

1 reference

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6 September 2017

DNA sequence, structure and gene expression of mycobacteriophage L5: a phage system for mycobacterial genetics

1 reference

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6 September 2017

The Cox protein is a modulator of directionality in bacteriophage P2 site-specific recombination

1 reference

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6 September 2017

Identification and nucleotide sequence analysis of a transfer-related region in the streptococcal conjugative transposon Tn5252.

1 reference

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6 September 2017

Characterization of genetic elements required for site-specific integration of Lactobacillus delbrueckii subsp. bulgaricus bacteriophage mv4 and construction of an integration-proficient vector for Lactobacillus plantarum

1 reference

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6 September 2017

Interaction of the lambda site-specific recombination protein Xis with attachment site DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

6 September 2017

The cox protein of bacteriophage P2 inhibits the formation of the repressor protein and autoregulates the early operon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

6 September 2017

Characterization of the cryptic lambdoid prophage DLP12 of Escherichia coli and overlap of the DLP12 integrase gene with the tRNA gene argU.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

6 September 2017

Molecular characterization of two proteins involved in the excision of the conjugative transposon Tn1545: homologies with other site-specific recombinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

6 September 2017

Nucleotide sequence and genetic characterization of staphylococcal bacteriophage L54a int and xis genes

1 reference

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6 September 2017

Basic local alignment search tool

1 reference

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6 September 2017

DNA sequence of satellite bacteriophage P4.

1 reference

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6 September 2017

Sequence analysis and comparison of int and xis genes from staphylococcal bacteriophages L54a and phi 11

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

6 September 2017

Site-specific recombination in Escherichia coli between the att sites of plasmid pSE211 from Saccharopolyspora erythraea

1 reference

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6 September 2017

Efficient excision of phage lambda from the Escherichia coli chromosome requires the Fis protein

1 reference

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6 September 2017

A switch in the formation of alternative DNA loops modulates lambda site-specific recombination

1 reference

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6 September 2017

Association of a retroelement with a P4-like cryptic prophage (retronphage phi R73) integrated into the selenocystyl tRNA gene of Escherichia coli

1 reference

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6 September 2017

Retron for the 67-base multicopy single-stranded DNA from Escherichia coli: a potential transposable element encoding both reverse transcriptase and Dam methylase functions

1 reference

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6 September 2017

Amino acid substitution matrices from protein blocks

1 reference

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6 September 2017

Characterization of bacteriophage lambda excisionase mutants defective in DNA binding

1 reference

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6 September 2017

Identification of site-specific recombination genes int and xis of the Rhizobium temperate phage 16-3.

1 reference

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6 September 2017

Sequence of Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product

1 reference

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6 September 2017

Novel organization of genes involved in prophage excision identified in the temperate lactococcal bacteriophage TP901-1.

1 reference

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6 September 2017

The multifunctional bacteriophage P2 cox protein requires oligomerization for biological activity

1 reference

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14 September 2017

The transcriptional switch of bacteriophage WPhi, a P2-related but heteroimmune coliphage.

1 reference

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14 September 2017

Genetic linkage and cotransfer of a novel, vanB-containing transposon (Tn5382) and a low-affinity penicillin-binding protein 5 gene in a clinical vancomycin-resistant Enterococcus faecium isolate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

14 September 2017

Genetic determinants of immunity and integration of temperate Myxococcus xanthus phage Mx8

1 reference

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14 September 2017

A resolvase-like protein is required for the site-specific integration of the temperate lactococcal bacteriophage TP901-1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

14 September 2017

Excisive recombination of the SLP1 element in Streptomyces lividans is mediated by Int and enhanced by Xis

1 reference

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14 September 2017

Identification and characterization of genes involved in excision of the Lactococcus lactis conjugative transposon Tn5276.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

14 September 2017

Integration and excision of bacteriophage lambda: the mechanism of conservation site specific recombination

1 reference

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14 September 2017

Improved detection of helix-turn-helix DNA-binding motifs in protein sequences

1 reference

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14 September 2017

The integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens is related to temperate bacteriophages.

1 reference

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Partial characterization of a genomic island associated with the multidrug resistance region of Salmonella enterica Typhymurium DT104.

1 reference

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Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages

1 reference

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23 June 2018

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1 reference

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1 reference

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1 reference

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23 June 2018

Regulation of excision of the conjugative transposon Tn916.

1 reference

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23 June 2018

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1 reference

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1 reference

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The Escherichia coli retrons Ec67 and Ec86 replace DNA between the cos site and a transcription terminator of a 186-related prophage

1 reference

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23 June 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Identification of an HP1 phage protein required for site-specific excision

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Nucleotide sequence of the 18-kb conjugative transposon Tn916 from Enterococcus faecalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Purification and properties of the Escherichia coli protein factor required for lambda integrative recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Structural and regulatory divergence among site-specific recombination genes of lambdoid phage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Control of directionality in lambda site specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Bending of the bacteriophage lambda attachment site by Escherichia coli integration host factor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

23 June 2018

Recombination and modular exchange in the genesis of new lambdoid phages

1 reference

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23 June 2018

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1 reference

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31 August 2018

Inducible prophages contribute to Salmonella virulence in mice

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31 August 2018

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31 August 2018

Mycobacteriophage D29 contains an integration system similar to that of the temperate mycobacteriophage L5.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55702

31 August 2018

Cell-type specificity of the Anabaena fdxN-element rearrangement requires xisH and xisI.

1 reference

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31 August 2018

Site-specific integration of the Streptomyces plasmid pSAM2 in Mycobacterium smegmatis

1 reference

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31 August 2018

Identification and characterization of mycobacteriophage L5 excisionase

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Defining the structural and functional roles of the carboxyl region of the bacteriophage lambda excisionase (Xis) protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mycobacteriophage D29 integrase-mediated recombination: specificity of mycobacteriophage integration

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of directionality in the site-specific recombination system of the Streptomyces phage phiC31

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification of the bacteriophage lambda xis gene product required for lambda excisive recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determinants of site-specific recombination in the lambdoid coliphage HK022. An evolutionary change in specificity

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Cro-like Apl repressor of coliphage 186 is required for prophage excision and binds near the phage attachment site

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reciprocal regulation of the early promoter region of bacteriophage HP1 by the Cox and Cl proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the chromosomal insertion site for pSAM2: functional analysis in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/11376138

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/29.11.2205

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

ResearchGate publication ID

0 references

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