(Q38494415)

3 September 2017

title

A hidden Markov model to identify combinatorial epigenetic regulation patterns for estrogen receptor α target genes (English)

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3 September 2017

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Russell Bonneville

1

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3 September 2017

Victor X Jin

series ordinal

2

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3 September 2017

language of work or name

English

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publication date

26 October 2012

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3 September 2017

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3 September 2017

volume

29

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3 September 2017

issue

1

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3 September 2017

page(s)

22-28

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A Maximization Technique Occurring in the Statistical Analysis of Probabilistic Functions of Markov Chains

3 September 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Tamoxifen for early breast cancer: an overview of the randomised trials. Early Breast Cancer Trialists' Collaborative Group

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Effects of chemotherapy and hormonal therapy for early breast cancer on recurrence and 15-year survival: an overview of the randomised trials

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Discovery and characterization of chromatin states for systematic annotation of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Mapping and analysis of chromatin state dynamics in nine human cell types

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

ChromHMM: automating chromatin-state discovery and characterization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Diverse gene expression and DNA methylation profiles correlate with differential adaptation of breast cancer cells to the antiestrogens tamoxifen and fulvestrant

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

NovoHMM: a hidden Markov model for de novo peptide sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Inference of hierarchical regulatory network of estrogen-dependent breast cancer through ChIP-based data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Finding genes in DNA with a Hidden Markov Model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

The UCSC Genome Browser Database: update 2006

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Estrogen-mediated epigenetic repression of large chromosomal regions through DNA looping

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

The UCSC Table Browser data retrieval tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Estrogen-induced rat breast carcinogenesis is characterized by alterations in DNA methylation, histone modifications and aberrant microRNA expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Reversibility of pre-malignant estrogen-induced epigenetic changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

W-ChIPeaks: a comprehensive web application tool for processing ChIP-chip and ChIP-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

BEDTools: a flexible suite of utilities for comparing genomic features

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Estrogen-mediated epigenetic repression of the imprinted gene cyclin-dependent kinase inhibitor 1C in breast cancer cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Estimating the Dimension of a Model

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Error bounds for convolutional codes and an asymptotically optimum decoding algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

An HMM approach to genome-wide identification of differential histone modification sites from ChIP-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

Charting histone modifications and the functional organization of mammalian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS639

10.1093/BIOINFORMATICS/BTS639

21 January 2018

Identifiers

DOI

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journals/bioinformatics/BonnevilleJ13

3 September 2017

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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