(Q38510604)

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Identification and quantitation of newly synthesized proteins in Escherichia coli by enrichment of azidohomoalanine-labeled peptides with diagonal chromatography.

scientific article published on 25 March 2009

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19321432%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

Identification and quantitation of newly synthesized proteins in Escherichia coli by enrichment of azidohomoalanine-labeled peptides with diagonal chromatography (English)

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24 January 2020

Escherichia coli

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24 January 2020

Richard R Sprenger

2

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24 January 2020

Jaap Willem Back

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24 January 2020

Chris G. de Koster

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24 January 2020

Klaas Hellingwerf

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Klaas J Hellingwerf

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24 January 2020

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Henk L Dekker

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24 January 2020

Merel A Nessen

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24 January 2020

Jan H van Maarseveen

6

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24 January 2020

Leo J de Koning

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24 January 2020

Luitzen de Jong

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24 January 2020

publication date

25 March 2009

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24 January 2020

Molecular & Cellular Proteomics

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24 January 2020

8

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24 January 2020

7

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24 January 2020

1599-1611

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24 January 2020

Convergence of Molecular, Modeling, and Systems Approaches for an Understanding of the Escherichia coli Heat Shock Response

1 reference

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Unnatural amino acid incorporation into virus-like particles

1 reference

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6 September 2017

Processing of N-terminal unnatural amino acids in recombinant human interferon-beta in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Copper-free click chemistry for dynamic in vivo imaging

1 reference

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6 September 2017

An aptly positioned azido group in the spacer of a protein cross-linker for facile mapping of lysines in close proximity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Precise protein quantification based on peptide quantification using iTRAQ.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Stable isotope labeling tandem mass spectrometry (SILT) to quantify protein production and clearance rates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Discovery of aminoacyl-tRNA synthetase activity through cell-surface display of noncanonical amino acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Global phosphoproteome analysis on human HepG2 hepatocytes using reversed-phase diagonal LC

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

A proteomic method for the analysis of changes in protein concentrations in response to systemic perturbations using metabolic incorporation of stable isotopes and mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Synthesis/degradation ratio mass spectrometry for measuring relative dynamic protein turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Toward a protein profile of Escherichia coli: comparison to its transcription profile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

GoMiner: a resource for biological interpretation of genomic and proteomic data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Dynamics of protein turnover, a missing dimension in proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Incorporation of azides into recombinant proteins for chemoselective modification by the Staudinger ligation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

The heat shock response of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Genome-wide expression profiling in Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Regulation of the Escherichia coli heat-shock response.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Genetic control of heat-shock protein synthesis and its bearing on growth and thermal resistance in Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Heat shock regulatory gene (htpR) of Escherichia coli is required for growth at high temperature but is dispensable at low temperature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Regulation of Ribosomal Protein Synthesis in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Measurement of protein using bicinchoninic acid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Interplay of two cis-acting mRNA regions in translational control of sigma 32 synthesis during the heat shock response of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

S-methylmethionine metabolism in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

6 September 2017

Fluorescence visualization of newly synthesized proteins in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

14 September 2017

Chromatographic isolation of methionine-containing peptides for gel-free proteome analysis: identification of more than 800 Escherichia coli proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

14 September 2017

Regulation of the heat-shock response in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

14 September 2017

Patterns of protein synthesis in E. coli: a catalog of the amount of 140 individual proteins at different growth rates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

27 September 2017

Transient rates of synthesis of individual polypeptides in E. coli following temperature shifts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

27 September 2017

Nucleotide sequence of the heat shock regulatory gene of E. coli suggests its protein product may be a transcription factor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

23 June 2018

Sigma 32 synthesis can regulate the synthesis of heat shock proteins in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

23 June 2018

A temperature sensitive nonsense mutation affecting the synthesis of a major protein of Escherichia coli K12

1 reference

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23 June 2018

Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

A new functional, chemical proteomics technology to identify purine nucleotide binding sites in complex proteomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

Proteome-wide characterization of N-glycosylation events by diagonal chromatography.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

Improved tandem mass spectrometric characterization of 3-nitrotyrosine sites in peptides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

Global transcriptome response of recombinant Escherichia coli to heat-shock and dual heat-shock recombinant protein induction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

Salt stress adaptation of Bacillus subtilis: a physiological proteomics approach.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

Mild and chemoselective peptide-bond cleavage of peptides and proteins at azido homoalanine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

Cell surface labeling of Escherichia coli via copper(I)-catalyzed [3+2] cycloaddition

1 reference

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31 August 2018

Selective dye-labeling of newly synthesized proteins in bacterial cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709250

31 August 2018

The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo.

1 reference

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31 August 2018

Presentation and detection of azide functionality in bacterial cell surface proteins

1 reference

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31 August 2018

Reversible labeling of cysteine-containing peptides allows their specific chromatographic isolation for non-gel proteome studies

1 reference

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31 August 2018

Identification of an expanded set of translationally active methionine analogues in Escherichia coli

1 reference

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31 August 2018

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1 reference

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31 August 2018

Protein Engineering by In Vivo Incorporation of Non-Natural Amino Acids: Control of Incorporation of Methionine Analogues by Methionyl-tRNA Synthetase

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M800392-MCP200

21 January 2018

The heat shock response of E. coli is regulated by changes in the concentration of σ32

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M800392-MCP200

21 January 2018

Effect of anaerobic and stationary phase growth conditions on the heat shock and oxidative stress responses in Escherichia coli K-12

1 reference

https://pubmed.ncbi.nlm.nih.gov/19321432

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expanding the Scope of Protein Biosynthesis by Altering the Methionyl-tRNA Synthetase Activity of a Bacterial Expression Host Scott Ross was helpful in conducting the 1D TOCSY NMR experiments and Pratip Bhattachary is thanked for assistance in other

1 reference

https://pubmed.ncbi.nlm.nih.gov/19321432

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/MCP.M800392-MCP200

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19321432%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19321432%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19321432%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

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