(Q38621627)

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Stable inheritance of DNA methylation allows creation of epigenotype maps and the study of epiallele inheritance patterns in the absence of genetic variation

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scholarly article

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Europe PubMed Central

PMC publication ID

4 September 2017

Stable inheritance of DNA methylation allows creation of epigenotype maps and the study of epiallele inheritance patterns in the absence of genetic variation (English)

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

DNA methylation

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genetic variation

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based on heuristic

inferred from title

Brigitte T Hofmeister

1

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

5

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

author name string

Kevin Lee

2

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Nicholas A Rohr

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

David W Hall

4

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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publication date

16 August 2017

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Europe PubMed Central

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4 September 2017

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

18

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

155

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

describes a project that uses

object named as

sklearn

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

https://scigraph.springernature.com/pub.10.1186/s13059-017-1288-x

0 references

Twenty-four-nucleotide siRNAs produce heritable trans-chromosomal methylation in F1 Arabidopsis hybrids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

On the origin and evolutionary consequences of gene body DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Rate, spectrum, and evolutionary dynamics of spontaneous epimutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

MethylC-seq library preparation for base-resolution whole-genome bisulfite sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Crop Epigenomics: Identifying, Unlocking, and Harnessing Cryptic Variation in Crop Genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Inheritance patterns and stability of DNA methylation variation in maize near-isogenic lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

'Leveling' the playing field for analyses of single-base resolution DNA methylomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetics and crop improvement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic responses to stress: triple defense?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Trans chromosomal methylation in Arabidopsis hybrids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Heritable epigenetic variation among maize inbreds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Transgenerational epigenetic instability is a source of novel methylation variants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic contribution to stress adaptation in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Changes in 24-nt siRNA levels in Arabidopsis hybrids suggest an epigenetic contribution to hybrid vigor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Energy use efficiency is characterized by an epigenetic component that can be directed through artificial selection to increase yield

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic programming: the challenge to species hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Assessing the impact of transgenerational epigenetic variation on complex traits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

The Sequence Alignment/Map format and SAMtools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic inheritance and the missing heritability problem

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic regulation of stress responses in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic natural variation in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic inheritance in rice plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Spontaneous mutational effects on reproductive traits of arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

An epigenetic mutation responsible for natural variation in floral symmetry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Exploiting induced and natural epigenetic variation for crop improvement.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

6 September 2017

Epigenetic variation creates potential for evolution of plant phenotypic plasticity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

14 September 2017

The recombination landscape in Arabidopsis thaliana F2 populations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

23 June 2018

Heterosis and inbreeding depression of epigenetic Arabidopsis hybrids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

Mapping the epigenetic basis of complex traits.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

Spontaneous epigenetic variation in the Arabidopsis thaliana methylome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

Trans-acting small RNA determines dominance relationships in Brassica self-incompatibility

1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

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1 reference

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31 August 2018

DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

1 reference

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31 August 2018

The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

Rapid Establishment of Genetic Incompatibility through Natural Epigenetic Variation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

31 August 2018

A tutorial on hidden Markov models and selected applications in speech recognition

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1288-X

21 January 2018

Human body epigenome maps reveal noncanonical DNA methylation variation

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1288-X

21 January 2018

Cutadapt removes adapter sequences from high-throughput sequencing reads

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1288-X

21 January 2018

Analysis of the platypus genome suggests a transposon origin for mammalian imprinting

1 reference

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21 January 2018

Epigenetic and genetic influences on DNA methylation variation in maize populations

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1288-X

21 January 2018

Epigenetic basis of morphological variation and phenotypic plasticity in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5559844

3 December 2018

Identifiers

10.1186/S13059-017-1288-X

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28814343%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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