(Q38655276)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

title

A hierarchical Bayesian model for understanding the spatiotemporal dynamics of the intestinal epithelium (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

main subject

spatiotemporal dynamics

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Oliver J. Maclaren

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Alexander G Fletcher

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Philip Maini

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

7

Helen M Byrne

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

author name string

Carmen Pin

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Alastair J M Watson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Simon R Carding

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

publication date

28 July 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

PLOS Computational Biology

26 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

volume

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

page(s)

e1005688

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

26 March 2020

copyright license

start time

28 July 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Jupyter notebook file

1 reference

Cell proliferation within small intestinal crypts is the principal driving force for cell migration on villi

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Systems Analysis of the Dynamic Inflammatory Response to Tissue Damage Reveals Spatiotemporal Properties of the Wound Attractant Gradient

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Models, measurement and inference in epithelial tissue dynamics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Unraveling intestinal stem cell behavior with models of crypt dynamics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Adult intestinal stem cells: critical drivers of epithelial homeostasis and regeneration

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Computational models reveal a passive mechanism for cell migration in the crypt

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Colorectal cancer through simulation and experiment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Model selection in systems and synthetic biology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Philosophy and the practice of Bayesian statistics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Epithelial barriers in homeostasis and disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Intestinal mucosal barrier function in health and disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Model criticism based on likelihood-free inference, with an application to protein network evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Accounting for uncertainty in ecological analysis: the strengths and limitations of hierarchical statistical modeling.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Stem cells, self-renewal, and differentiation in the intestinal epithelium

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Examples of mathematical modeling: tales from the crypt

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Self-renewal and cancer of the gut: two sides of a coin.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Intestinal crypt proliferation. II. Computer modelling of mitotic index data provides further evidence for lateral and vertical cell migration in the absence of mitotic activity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Approximate Bayesian computation (ABC) gives exact results under the assumption of model error

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Measuring statistical evidence using relative belief

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Intestinal cell proliferation. I. A comprehensive model of steady-state proliferation in the crypt.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Scoring mitotic activity in longitudinal sections of crypts of the small intestine.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Cell migration velocities in the crypts of the small intestine after cytotoxic insult are not dependent on mitotic activity.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Defining stem cell dynamics in models of intestinal tumor initiation.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Modeling biological tissue growth: discrete to continuum representations

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Continuous clonal labeling reveals small numbers of functional stem cells in intestinal crypts and adenomas.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Intestinal stem cell replacement follows a pattern of neutral drift

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Statistical inference for noisy nonlinear ecological dynamic systems

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

From a discrete to a continuum model of cell dynamics in one dimension.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

From microscopic to macroscopic descriptions of cell migration on growing domains.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Continuum approximations of individual-based models for epithelial monolayers.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Hierarchical bayesian statistics: merging experimental and modeling approaches in ecology.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

Bayesian ranking of biochemical system models

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5550005

31 August 2018

Science and Statistics

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005688

Causal inference in statistics: An overview

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005688

Approximate Bayesian computational methods

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005688

Cell migration and organization in the intestinal crypt using a lattice-free model

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28753601

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Circadian variation in migration velocity in small intestinal epithelium

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28753601

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Theoretical implications for cell migration through the crypt and the villus of labelling studies conducted at each position within the crypt

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28753601

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1005688

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/MaclarenPPCWFBM17

26 March 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28753601%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

PubMed publication ID

28753601

1 reference