(Q38764576)

English

Putatively novel serotypes and the potential for reduced vaccine effectiveness: capsular locus diversity revealed among 5405 pneumococcal genomes

scientific article published on October 2016

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Putatively novel serotypes and the potential for reduced vaccine effectiveness: capsular locus diversity revealed among 5405 pneumococcal genomes (English)

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Andries J van Tonder

object named as

Andries J van Tonder

1

0 references

Gunnsteinn Haraldsson

object named as

Gunnsteinn Haraldsson

4

0 references

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Keith A Jolley

5

0 references

object named as

James E Bray

2

0 references

Stephen D Bentley

8

object named as

Stephen D Bentley

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Angela B Brueggemann

12

object named as

Angela B Brueggemann

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

author name string

Sigríður J Quirk

3

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Martin C J Maiden

6

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Steen Hoffmann

7

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Ásgeir Haraldsson

9

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Helga Erlendsdóttir

10

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Karl G Kristinsson

11

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

publication date

1 October 2016

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Europe PubMed Central

PMC publication ID

6 September 2017

Microbial genomics

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

2

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Europe PubMed Central

PMC publication ID

6 September 2017

10

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

000090

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

The PneuCarriage Project: A Multi-Centre Comparative Study to Identify the Best Serotyping Methods for Examining Pneumococcal Carriage in Vaccine Evaluation Studies

1 reference

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Characterization of 19A-like 19F pneumococcal isolates from Papua New Guinea and Fiji

1 reference

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Genomics Reveals the Worldwide Distribution of Multidrug-Resistant Serotype 6E Pneumococci

1 reference

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Five winters of pneumococcal serotype replacement in UK carriage following PCV introduction

1 reference

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ClonalFrameML: efficient inference of recombination in whole bacterial genomes

1 reference

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Predicting the impact of new pneumococcal conjugate vaccines: serotype composition is not enough

1 reference

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Defining the estimated core genome of bacterial populations using a Bayesian decision model

1 reference

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Prokka: rapid prokaryotic genome annotation

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Dense genomic sampling identifies highways of pneumococcal recombination

1 reference

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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0

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Dominant role of nucleotide substitution in the diversification of serotype 3 pneumococci over decades and during a single infection

1 reference

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6 September 2017

Serotype-specific changes in invasive pneumococcal disease after pneumococcal conjugate vaccine introduction: a pooled analysis of multiple surveillance sites

1 reference

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Population genomics of post-vaccine changes in pneumococcal epidemiology.

1 reference

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6 September 2017

Pneumococcal capsular switching: a historical perspective

1 reference

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6 September 2017

Biochemical, genetic, and serological characterization of two capsule subtypes among Streptococcus pneumoniae Serotype 20 strains: discovery of a new pneumococcal serotype

1 reference

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PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods.

1 reference

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Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain.

1 reference

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6 September 2017

Capsules of Streptococcus pneumoniae and other bacteria: paradigms for polysaccharide biosynthesis and regulation

1 reference

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6 September 2017

Serotype replacement in disease after pneumococcal vaccination

1 reference

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Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

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Easyfig: a genome comparison visualizer

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6 September 2017

Rapid pneumococcal evolution in response to clinical interventions

1 reference

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BIGSdb: Scalable analysis of bacterial genome variation at the population level.

1 reference

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FastTree 2--approximately maximum-likelihood trees for large alignments

1 reference

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Burden of disease caused by Streptococcus pneumoniae in children younger than 5 years: global estimates

1 reference

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6 September 2017

Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14

1 reference

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

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Vaccine escape recombinants emerge after pneumococcal vaccination in the United States

1 reference

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

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Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes

1 reference

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Evolutionary genetics of the capsular locus of serogroup 6 pneumococci

1 reference

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Genetic basis for the structural difference between Streptococcus pneumoniae serotype 15B and 15C capsular polysaccharides.

1 reference

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Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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Pneumococcus with the "6E" cps Locus Produces Serotype 6B Capsular Polysaccharide.

1 reference

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1 reference

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Update of pneumococcal PCR serotyping assay for detection of a commonly occurring type 19F wzy variant in Brazil

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Rarely occurring 19A-like cps locus from a serotype 19F pneumococcal isolate indicates continued need of serology-based quality control for PCR-based serotype determinations

1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/28133541

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Pneumococcal vaccines WHO position paper - 2012 - recommendations

1 reference

https://pubmed.ncbi.nlm.nih.gov/28133541

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Region-specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae

1 reference

https://pubmed.ncbi.nlm.nih.gov/28133541

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1099/MGEN.0.000090

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

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