(Q38821430)

6 September 2017

Chromosome conformation capture technologies and their impact in understanding genome function (English)

1 reference

6 September 2017

Giacomo Cavalli

2

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author name string

Satish Sati

series ordinal

1

1 reference

PubMed ID

27130552

6 September 2017

language of work or name

1 reference

30 April 2016

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6 September 2017

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6 September 2017

126

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6 September 2017

1

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6 September 2017

33-44

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Creative Commons Attribution 4.0 International

6 September 2017

start time

30 April 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1007/s00412-016-0593-6

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cites work

A switch between topological domains underlies HoxD genes collinearity in mouse limbs

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Mitotic chromosome scaffold structure: new approaches to an old controversy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A matter of scale: how emerging technologies are redefining our view of chromosome architecture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Functional implications of genome topology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Induction of chromosome damage by ultraviolet light and caffeine: correlation of cytogenetic evaluation and flow karyotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Inheritance of gene density-related higher order chromatin arrangements in normal and tumor cell nuclei

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Differences in the localization and morphology of chromosomes in the human nucleus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

The three 'C' s of chromosome conformation capture: controls, controls, controls.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Capturing chromosome conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Topological domains in mammalian genomes identified by analysis of chromatin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A genome-wide 3C-method for characterizing the three-dimensional architectures of genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

From cells to chromatin: capturing snapshots of genome organization with 5C technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Chromatin conformation signatures of cellular differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

An oestrogen-receptor-α-bound human chromatin interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

The centennial of the Cajal body.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Actual ligation frequencies in the chromosome conformation capture procedure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Disclosure of a structural milieu for the proximity ligation reveals the elusive nature of an active chromatin hub.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Enhancer loops appear stable during development and are associated with paused polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Characterization of chromosomal architecture in Arabidopsis by chromosome conformation capture

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Quantitative analysis of chromosome conformation capture assays (3C-qPCR).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

CTCF-mediated functional chromatin interactome in pluripotent cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Mapping Nucleosome Resolution Chromosome Folding in Yeast by Micro-C

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experiment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A high-resolution map of the three-dimensional chromatin interactome in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Targeted Chromatin Capture (T2C): a novel high resolution high throughput method to detect genomic interactions and regulatory elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

My5C: web tools for chromosome conformation capture studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

High-resolution mapping of the spatial organization of a bacterial chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Interchromosomal interactions and olfactory receptor choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Systematic localization of common disease-associated variation in regulatory DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Higher-order genome organization in human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Comparison of Hi-C results using in-solution versus in-nucleus ligation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Organization of the mitotic chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Spatial partitioning of the regulatory landscape of the X-inactivation centre

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Architectural protein subclasses shape 3D organization of genomes during lineage commitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Topologically associating domains are stable units of replication-timing regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Hox in motion: tracking HoxA cluster conformation during differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Classifying leukemia types with chromatin conformation data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Genome-wide mapping of promoter-anchored interactions with close to single-enhancer resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Large-scale functional organization of long-range chromatin interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

The role of chromosome domains in shaping the functional genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Three-dimensional folding and functional organization principles of the Drosophila genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A novel 6C assay uncovers Polycomb-mediated higher order chromatin conformations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

4C technology: protocols and data analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Robust 4C-seq data analysis to screen for regulatory DNA interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Comparative Hi-C reveals that CTCF underlies evolution of chromosomal domain architecture

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Exploring long-range genome interactions using the WashU Epigenome Browser

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-016-0593-6

Human stem cells as targets for the aging and diseases of aging processes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27130552

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genome-wide scanning of HoxB1-associated loci in mouse ES cells using an open-ended Chromosome Conformation Capture methodology

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27130552

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Rise, fall and resurrection of chromosome territories: a historical perspective. Part II. Fall and resurrection of chromosome territories during the 1950s to 1980s. Part III. Chromosome territories and the functional nuclear architecture: experiment

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27130552

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S00412-016-0593-6

1 reference

6 September 2017

1 reference

PubMed ID

27130552