(Q38856893)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

review article

1 reference

title

Transcriptomics, proteomics and metabolomics driven biomarker discovery in COPD: an update (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

0 references

0 references

chronic obstructive pulmonary disease

1 reference

1 reference

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Koel Chaudhury

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

author name string

Nilanjana Ghosh

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Brajesh Singh

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Rintu Banerjee

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Parthasarathi Bhattacharyya

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

publication date

20 June 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

Expert Review of Molecular Diagnostics: new diagnostic technologies are set to revolutionise healthcare

12 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

volume

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

page(s)

897-913

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

Significance of bioinformatics in research of chronic obstructive pulmonary disease

12 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Using 'omics' to define pathogenesis and biomarkers of Parkinson's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Gel-based versus gel-free proteomics: a review.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Comparing and combining NMR spectroscopy and mass spectrometry in metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

High-throughput serum NMR metabonomics for cost-effective holistic studies on systemic metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Biomarkers of lung damage associated with tobacco smoke in induced sputum

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Application of 'omics technologies to biomarker discovery in inflammatory lung diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Gel-based and gel-free proteomic technologies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Clinical proteomic biomarkers: relevant issues on study design & technical considerations in biomarker development

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomics: challenges, techniques and possibilities to overcome biological sample complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Identification of novel diagnostic biomarkers for asthma and chronic obstructive pulmonary disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomic biomarkers in plasma that differentiate rapid and slow decline in lung function in adult cigarette smokers with chronic obstructive pulmonary disease (COPD).

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Analysis of the plasma proteome in COPD: Novel low abundance proteins reflect the severity of lung remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Induced sputum: a window to lung pathology

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Application of proteomics and peptidomics to COPD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Identification of proteomic signatures associated with lung cancer and COPD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Identification of lipocalin and apolipoprotein A1 as biomarkers of chronic obstructive pulmonary disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Elevated sputum BPIFB1 levels in smokers with chronic obstructive pulmonary disease: a longitudinal study

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Peptidome profiling of induced sputum by mesoporous silica beads and MALDI-TOF MS for non-invasive biomarker discovery of chronic inflammatory lung diseases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Alterations in the sputum proteome and transcriptome in smokers and early-stage COPD subjects

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Protein networks in induced sputum from smokers and COPD patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Collection and analysis of exhaled breath condensate in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Protein pattern of exhaled breath condensate and saliva.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomics in pulmonary medicine

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Profiling the proteome of exhaled breath condensate in healthy smokers and COPD patients by LC-MS/MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Protein composition of bronchoalveolar lavage fluid and airway surface liquid from newborn pigs

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomic analysis of undiluted lung epithelial lining fluid

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomic study of human bronchoalveolar lavage fluids from smokers with chronic obstructive pulmonary disease by combining surface-enhanced laser desorption/ionization-mass spectrometry profiling with mass spectrometric protein identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Asthma and COPD proteomics: current approaches and future directions

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomic analysis of human epithelial lining fluid by microfluidics-based nanoLC-MS/MS: a feasibility study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Susceptibility to COPD: differential proteomic profiling after acute smoking

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteome analysis of bronchoalveolar lavage in lung diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

The proteomics big challenge for biomarkers and new drug-targets discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Large-scale, ion-current-based proteomics investigation of bronchoalveolar lavage fluid in chronic obstructive pulmonary disease patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomics-based biomarkers in chronic obstructive pulmonary disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Cigarette smoke induces an unfolded protein response in the human lung: a proteomic approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomics of human lung tissue identifies surfactant protein A as a marker of chronic obstructive pulmonary disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Proteomic analysis in lung tissue of smokers and COPD patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Hemoglobin α and β are ubiquitous in the human lung, decline in idiopathic pulmonary fibrosis but not in COPD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Spectroscopic and statistical techniques for information recovery in metabonomics and metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Systems biology: Metabonomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Innovation: Metabolomics: the apogee of the omics trilogy

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Metabonomic analysis of exhaled breath condensate in adults by nuclear magnetic resonance spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Exhaled volatile organic compounds for phenotyping chronic obstructive pulmonary disease: a cross-sectional study

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

(1)H nuclear magnetic resonance metabolomics analysis identifies novel urinary biomarkers for lung function

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Metabonomic profiling of serum and urine by (1)H NMR-based spectroscopy discriminates patients with chronic obstructive pulmonary disease and healthy individuals

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Metabolomic profiling of asthma and chronic obstructive pulmonary disease: A pilot study differentiating diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Fusion of the (1)H NMR data of serum, urine and exhaled breath condensate in order to discriminate chronic obstructive pulmonary disease and obstructive sleep apnea syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Pilot analysis of the plasma metabolite profiles associated with emphysematous Chronic Obstructive Pulmonary Disease phenotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Serum Metabolite Biomarkers Discriminate Healthy Smokers from COPD Smokers

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Plasma sphingolipids associated with chronic obstructive pulmonary disease phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Microarrays, deep sequencing and the true measure of the transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Assessing the human immune system through blood transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Critical COPD respiratory illness is linked to increased transcriptomic activity of neutrophil proteases genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Peripheral blood mononuclear cell gene expression in chronic obstructive pulmonary disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Down regulation of T cell receptor expression in COPD pulmonary CD8 cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

CD4+ T-Cell Profiles and Peripheral Blood Ex-Vivo Responses to T-Cell Directed Stimulation Delineate COPD Phenotypes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Differential expression of vitamin E and selenium-responsive genes by disease severity in chronic obstructive pulmonary disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Network Analysis of Lung Transcriptomics Reveals a Distinct B-Cell Signature in Emphysema

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Induced sputum genes associated with spirometric and radiological disease severity in COPD ex-smokers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Statistical design for biospecimen cohort size in proteomics-based biomarker discovery and verification studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

On the utility of pooling biological samples in microarray experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

A simple method for assessing sample sizes in microarray experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Quick calculation for sample size while controlling false discovery rate with application to microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Power and sample size estimation in microarray studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

MetSizeR: selecting the optimal sample size for metabolomic studies using an analysis based approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

MetaboAnalyst 3.0--making metabolomics more meaningful

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Sample size determination in microarray experiments for class comparison and prognostic classification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

False discovery rate, sensitivity and sample size for microarray studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Microarray experimental design: power and sample size considerations

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability introduced by DNA extraction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Statistical aspects of quantitative real-time PCR experiment design.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

High-resolution analysis of the 5'-end transcriptome using a next generation DNA sequencer

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Sample size calculation for differential expression analysis of RNA-seq data under Poisson distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Calculating sample size estimates for RNA sequencing data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Navigating the road ahead: addressing challenges for use of metabolomics in epidemiology studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Metabolomics and Its Application to Acute Lung Diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

21 January 2018

Comorbidities of COPD

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Chronic Obstructive Pulmonary Disease Genetics: A Review of the Past and a Look Into the Future

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Opportunities and challenges in omics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Pitfalls and limitations in translation from biomarker discovery to clinical utility in predictive and personalised medicine

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Metabolic profiling detects biomarkers of protein degradation in COPD patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Targeted metabolomics identifies perturbations in amino acid metabolism that sub-classify patients with COPD

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Is NMR-based metabolomic analysis of exhaled breath condensate accurate?

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

Non-invasive metabolomic analysis of breath using differential mobility spectrometry in patients with chronic obstructive pulmonary disease and healthy smokers

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F14737159.2016.1198258

10.1080/14737159.2016.1198258

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267972%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference