(Q39089415)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27991881%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

title

Relic DNA is abundant in soil and obscures estimates of soil microbial diversity (English)

1 reference

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30 March 2020

1 reference

1 reference

1

1 reference

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30 March 2020

Michael S Strickland

5

1 reference

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30 March 2020

Noah Fierer

6

1 reference

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30 March 2020

author name string

Patrick J Marsden

2

1 reference

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30 March 2020

Jonathan W Leff

3

1 reference

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30 March 2020

Emily E Morgan

4

1 reference

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30 March 2020

language of work or name

1 reference

19 December 2016

1 reference

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30 March 2020

1 reference

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30 March 2020

volume

2

1 reference

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30 March 2020

page(s)

16242

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Release and persistence of extracellular DNA in the environment

30 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Cycling of extracellular DNA in the soil environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Use of propidium monoazide for live/dead distinction in microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Computational improvements reveal great bacterial diversity and high metal toxicity in soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Unusual biology across a group comprising more than 15% of domain Bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Discovery of novel intermediate forms redefines the fungal tree of life

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Microbial rRNA:rDNA gene ratios may be unexpectedly low due to extracellular DNA preservation in soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Dead or alive: molecular assessment of microbial viability

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Effect of DNA extraction procedure, repeated extraction and ethidium monoazide (EMA)/propidium monoazide (PMA) treatment on overall DNA yield and impact on microbial fingerprints for bacteria, fungi and archaea in a reference soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Effects of long-term fertilization of forest soils on potential nitrification and on the abundance and community structure of ammonia oxidizers and nitrite oxidizers

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

A critical review on the role of mycorrhizal fungi in the uptake of phosphorus by plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Fungal biogeography. Global diversity and geography of soil fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

The bacterial biogeography of British soils.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Water content differences have stronger effects than plant functional groups on soil bacteria in a steppe ecosystem

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Key Edaphic Properties Largely Explain Temporal and Geographic Variation in Soil Microbial Communities across Four Biomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Soil Respiration and Bacterial Structure and Function after 17 Years of a Reciprocal Soil Transplant Experiment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Tackling soil diversity with the assembly of large, complex metagenomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Extracellular DNA plays a key role in deep-sea ecosystem functioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Evolution of the plankton paleome in the Black Sea from the Deglacial to Anthropocene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Microbial survival: the paleome: a sedimentary genetic record of past microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Evaluation of viability-qPCR detection system on viable and dead Salmonella serovar Enteritidis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Evaluation of the Propidium Monoazide-quantitative Polymerase Chain Reaction Method for the Detection of Viable Enterococcus faecalis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Limitations of Using Propidium Monoazide with qPCR to Discriminate between Live and Dead Legionella in Biofilm Samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Strain-dependent variation in 18S ribosomal DNA Copy numbers in Aspergillus fumigatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

UPARSE: highly accurate OTU sequences from microbial amplicon reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Search and clustering orders of magnitude faster than BLAST

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

The UNITE database for molecular identification of fungi--recent updates and future perspectives

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

A direct approach to false discovery rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

Pyrosequencing enumerates and contrasts soil microbial diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

inferred from DOI database lookup

7 January 2021

based on heuristic

DNA adsorption to soils and sediments

1 reference

https://api.crossref.org/works/10.1038%2FNMICROBIOL.2016.242

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NMICROBIOL.2016.242

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27991881%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

1 reference