(Q39110333)

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Cell envelope stress response in Bacillus licheniformis: integrating comparative genomics, transcriptional profiling, and regulon mining to decipher a complex regulatory network

scientific article published on 25 August 2006

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

Cell envelope stress response in Bacillus licheniformis: integrating comparative genomics, transcriptional profiling, and regulon mining to decipher a complex regulatory network (English)

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

comparative genomics

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based on heuristic

inferred from title

Bacillus licheniformis

object named as

Bacillus licheniformis

1 reference

based on heuristic

inferred from title

Armin Ehrenreich

3

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

author name string

Tina Wecke

1

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

Birgit Veith

2

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

Thorsten Mascher

4

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

language of work or name

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publication date

25 August 2006

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Europe PubMed Central

PMC publication ID

9 September 2017

Journal of Bacteriology

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Europe PubMed Central

PMC publication ID

9 September 2017

188

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

21

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

7500-7511

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

Intramembrane-sensing histidine kinases: a new family of cell envelope stress sensors in Firmicutes bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

9 September 2017

Regulation of LiaRS-dependent gene expression in bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system

1 reference

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Pushing the envelope: extracytoplasmic stress responses in bacterial pathogens

1 reference

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Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities

1 reference

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Conserved and variable functions of the sigmaE stress response in related genomes

1 reference

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Vancomycin stress response in a sensitive and a tolerant strain of Streptococcus pneumoniae

1 reference

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The phage-shock-protein response.

1 reference

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Envelope stress responses and Gram-negative bacterial pathogenesis.

1 reference

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Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species

1 reference

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DNA microarrays: experimental issues, data analysis, and application to bacterial systems

1 reference

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The Complete Genome Sequence of Bacillus licheniformis DSM13, an Organism with Great Industrial Potential

1 reference

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Construction and validation of the Rhodobacter sphaeroides 2.4.1 DNA microarray: transcriptome flexibility at diverse growth modes

1 reference

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Regulation of the Escherichia coli sigma-dependent envelope stress response

1 reference

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9 September 2017

Control of the alternative sigma factor sigmaE in Escherichia coli

1 reference

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9 September 2017

Two-component system VraSR positively modulates the regulation of cell-wall biosynthesis pathway in Staphylococcus aureus

1 reference

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Microarray expression profiling: capturing a genome-wide portrait of the transcriptome

1 reference

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Regulation of the Bacillus subtilis bcrC bacitracin resistance gene by two extracytoplasmic function sigma factors.

1 reference

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Genomic DNA standards for gene expression profiling in Mycobacterium tuberculosis

1 reference

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9 September 2017

The extracytoplasmic function (ECF) sigma factors

1 reference

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9 September 2017

Microarray analysis of bacterial pathogenicity

1 reference

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Periplasmic stress and ECF sigma factors

1 reference

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9 September 2017

Antibiotic resistance with particular reference to soil microorganisms

1 reference

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9 September 2017

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

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9 September 2017

Identification of the up- and down-regulated genes in vancomycin-resistant Staphylococcus aureus strains Mu3 and Mu50 by cDNA differential hybridization method

1 reference

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9 September 2017

The biosynthesis and functionality of the cell-wall of lactic acid bacteria

1 reference

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9 September 2017

Promoter recognition by Bacillus subtilis sigmaW: autoregulation and partial overlap with the sigmaX regulon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

9 September 2017

SMART, a simple modular architecture research tool: identification of signaling domains

1 reference

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9 September 2017

Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

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Mechanism of action of bacitracin: complexation with metal ion and C 55 -isoprenyl pyrophosphate

1 reference

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Applications of DNA microarrays in microbial systems

1 reference

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A bacitracin-resistant Bacillus subtilis gene encodes a homologue of the membrane-spanning subunit of the Bacillus licheniformis ABC transporter

1 reference

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1 reference

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Regulation of the Bacillus subtilis extracytoplasmic function protein sigma(Y) and its target promoters

1 reference

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SigM, an extracytoplasmic function sigma factor of Bacillus subtilis, is activated in response to cell wall antibiotics, ethanol, heat, acid, and superoxide stress

1 reference

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1 reference

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Regulog analysis: detection of conserved regulatory networks across bacteria: application to Staphylococcus aureus

1 reference

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Non-specific, general and multiple stress resistance of growth-restricted Bacillus subtilis cells by the expression of the sigmaB regulon.

1 reference

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Antibiotic-inducible promoter regulated by the cell envelope stress-sensing two-component system LiaRS of Bacillus subtilis

1 reference

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Overexpression of genes of the cell wall stimulon in clinical isolates of Staphylococcus aureus exhibiting vancomycin-intermediate- S. aureus-type resistance to vancomycin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

17 June 2018

Bacillus licheniformis sigB operon encoding the general stress transcription factor sigma B.

1 reference

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17 June 2018

Complex formation between bacitracin peptides and isoprenyl pyrophosphates. The specificity of lipid-peptide interactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

17 June 2018

The phosphate-starvation response of Bacillus licheniformis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

VraSR two-component regulatory system and its role in induction of pbp2 and vraSR expression by cell wall antimicrobials in Staphylococcus aureus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

The extracellular proteome of Bacillus licheniformis grown in different media and under different nutrient starvation conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

BcrC from Bacillus subtilis acts as an undecaprenyl pyrophosphate phosphatase in bacitracin resistance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

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A proteomic view of cell physiology of Bacillus licheniformis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

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21 August 2018

Genome-wide transcriptional profiling of the response of Staphylococcus aureus to cell-wall-active antibiotics reveals a cell-wall-stress stimulon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

The BceRS two-component regulatory system induces expression of the bacitracin transporter, BceAB, in Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

Antibiotics that inhibit cell wall biosynthesis induce expression of the Bacillus subtilis sigma(W) and sigma(M) regulons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

Distribution and variation of bacitracin synthetase gene sequences in laboratory stock strains of Bacillus licheniformis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

21 August 2018

The two-component regulatory system BacRS is associated with bacitracin 'self-resistance' of Bacillus licheniformis ATCC 10716.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636251

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Identification of sigma(V)-dependent genes of Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16936031

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches

1 reference

https://pubmed.ncbi.nlm.nih.gov/16936031

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulatory relationship of two-component and ABC transport systems and clustering of their genes in the Bacillus/Clostridium group, suggest a functional link between them

1 reference

https://pubmed.ncbi.nlm.nih.gov/16936031

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the Bacillus subtilis YxdJ response regulator as the inducer of expression for the cognate ABC transporter YxdLM

1 reference

https://pubmed.ncbi.nlm.nih.gov/16936031

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacitracin production by a new strain of Bacillus subtilis. Extraction, purification, and characterization

1 reference

https://pubmed.ncbi.nlm.nih.gov/16936031

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cationic antimicrobial peptides elicit a complex stress response in Bacillus subtilis that involves ECF-type sigma factors and two-component signal transduction systems

1 reference

https://pubmed.ncbi.nlm.nih.gov/16936031

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.01110-06

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

release_qyoc6lbgkvaqvjhb3sca6gip4e

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https://api.fatcat.wiki/v0/release/qyoc6lbgkvaqvjhb3sca6gip4e

24 November 2022

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mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

9 September 2017

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