(Q39208469)

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An integrated epigenetic and transcriptomic analysis reveals distinct tissue-specific patterns of DNA methylation associated with atopic dermatitis

scientific article published on 13 February 2014

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scholarly article

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Europe PubMed Central

PubMed publication ID

10 September 2017

An integrated epigenetic and transcriptomic analysis reveals distinct tissue-specific patterns of DNA methylation associated with atopic dermatitis (English)

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PubMed publication ID

10 September 2017

DNA methylation

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Christian Gieger

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10 September 2017

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Sonja Zeilinger

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Hansjörg Baurecht

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Hansjörg Baurecht

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Holger Prokisch

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Holger Prokisch

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Stephan Weidinger

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Stephan Weidinger

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Thomas Illig

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10 September 2017

7

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Norman Klopp

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10 September 2017

Katharina Schramm

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object named as

Katharina Schramm

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10 September 2017

author name string

Elke Rodríguez

1

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10 September 2017

Anna Franziska Wahn

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10 September 2017

Anja Kretschmer

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10 September 2017

Melanie Hotze

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Europe PubMed Central

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10 September 2017

Brigitte Kühnel

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Jürgen Harder

13

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Liliana Cifuentes

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10 September 2017

Natalija Novak

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10 September 2017

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publication date

13 February 2014

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10 September 2017

Journal of Investigative Dermatology

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Europe PubMed Central

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10 September 2017

134

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10 September 2017

7

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10 September 2017

1873-1883

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10 September 2017

https://scigraph.springernature.com/pub.10.1038/jid.2014.87

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Interferon alpha-inducible protein 27 (IFI27) is upregulated in psoriatic skin and certain epithelial cancers

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A pipeline for the quantitative analysis of CG dinucleotide methylation using mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm

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https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interferon-stimulated genes and their antiviral effector functions

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https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-density genotyping study identifies four new susceptibility loci for atopic dermatitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The pattern recognition receptor NOD2 mediates Staphylococcus aureus-induced IL-17C expression in keratinocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The phenotypic and molecular genetic features of pachyonychia congenita

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A subset of methylated CpG sites differentiate psoriatic from normal skin.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Aging and chronic sun exposure cause distinct epigenetic changes in human skin

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel insights into the role of S100A8/A9 in skin biology

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A simple salting out procedure for extracting DNA from human nucleated cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Demethylation of the FCER1G promoter leads to FcεRI overexpression on monocytes of patients with atopic dermatitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vitamin D analog calcipotriol suppresses the Th17 cytokine-induced proinflammatory S100 "alarmins" psoriasin (S100A7) and koebnerisin (S100A15) in psoriasis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning and characterization of multiple human genes and cDNAs encoding highly related type II keratin 6 isoforms

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Atopic Dermatitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Specificity protein 1 is pivotal in the skin's antiviral response

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential expression of fatty acid transport proteins in epidermis and skin appendages.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assessing the impact of transgenerational epigenetic variation on complex traits

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AGE-modified collagens I and III induce keratinocyte terminal differentiation through AGE receptor CD36: epidermal-dermal interaction in acquired perforating dermatosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The DNA methylation paradox

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic DNA methylation across diverse human cell lines and tissues

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intrinsic atopic dermatitis shows similar TH2 and higher TH17 immune activation compared with extrinsic atopic dermatitis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The human keratins: biology and pathology

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functions of DNA methylation: islands, start sites, gene bodies and beyond

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA methylation of the filaggrin gene adds to the risk of eczema associated with loss-of-function variants

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

lumi: a pipeline for processing Illumina microarray

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Large-scale DNA microarray analysis of atopic skin lesions shows overexpression of an epidermal differentiation gene cluster in the alternative pathway and lack of protective gene expression in the cornified envelope

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Charting a dynamic DNA methylation landscape of the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of single CpG sites as proxies of CpG island methylation states at the genome scale

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epigenetics meets metabolomics: an epigenome-wide association study with blood serum metabolic traits

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Environmental epigenetics and asthma: current concepts and call for studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced expression and secretion of antimicrobial peptides in atopic dermatitis and after superficial skin injury.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human S100A15 splice variants are differentially expressed in inflammatory skin diseases and regulated through Th1 cytokines and calcium

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Silent mysteries: epigenetic paradigms could hold the key to conquering the epidemic of allergy and immune disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulation of keratinocyte gene expression and differentiation by PPAR-selective ligands and tetradecylthioacetic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of DNMT-1 in patients with atopic dermatitis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

S100 proteins and the skin: a review

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel CpG island set identifies tissue-specific methylation at developmental gene loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression and Localization of Peroxisome Proliferator-Activated Receptors and Nuclear Factor κB in Normal and Lesional Psoriatic Skin

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Locus 1q21 Gene expression changes in atopic dermatitis skin lesions: deregulation of small proline-rich region 1A

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel S100A7 (psoriasin)/S100A15 (koebnerisin) subfamily: highly homologous but distinct in regulation and function

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The antimicrobial protein psoriasin (S100A7) is upregulated in atopic dermatitis and after experimental skin barrier disruption.

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

1 reference

https://pubmed.ncbi.nlm.nih.gov/24739813

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1038/JID.2014.87

1 reference

Europe PubMed Central

PubMed publication ID

10 September 2017

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

10 September 2017

ResearchGate publication ID

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