(Q39455661)

12 September 2017

A robust ambient temperature collection and stabilization strategy: Enabling worldwide functional studies of the human microbiome (English)

1 reference

12 September 2017

0 references

9

J Craig Venter

0 references

Shibu Yooseph

series ordinal

7

object named as

Shibu Yooseph

1 reference

12 September 2017

4

Sarah K Highlander

1 reference

12 September 2017

10

Karen E Nelson

1 reference

12 September 2017

6

Victor Seguritan

1 reference

12 September 2017

1

Ericka L Anderson

1 reference

12 September 2017

5

Mark Dayrit

1 reference

12 September 2017

8

William Biggs

1 reference

12 September 2017

Weizhong Li

2

1 reference

12 September 2017

Niels Klitgord

series ordinal

3

1 reference

12 September 2017

Marcus B Jones

series ordinal

11

1 reference

12 September 2017

language of work or name

English

0 references

publication date

25 August 2016

1 reference

12 September 2017

1 reference

12 September 2017

6

1 reference

12 September 2017

31731

1 reference

Creative Commons Attribution 4.0 International

12 September 2017

start time

25 August 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/srep31731

0 references

cites work

Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Sample storage conditions significantly influence faecal microbiome profiles.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Context and the human microbiome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Library preparation methodology can influence genomic and functional predictions in human microbiome research

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Methods for Improving Human Gut Microbiome Data by Reducing Variability through Sample Processing and Storage of Stool

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

The role of the gut microbiome in the healthy adult status

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Bacterial lipodipeptide, Lipid 654, is a microbiome-associated biomarker for multiple sclerosis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

The human gut microbiome as a screening tool for colorectal cancer.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Trimmomatic: a flexible trimmer for Illumina sequence data

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Pfam: the protein families database

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Defining a healthy human gut microbiome: current concepts, future directions, and clinical applications

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

A metagenome-wide association study of gut microbiota in type 2 diabetes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Storage conditions of intestinal microbiota matter in metagenomic analysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

A framework for human microbiome research

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

High-throughput sequencing of 16S rRNA gene amplicons: effects of extraction procedure, primer length and annealing temperature

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Accurate genome relative abundance estimation based on shotgun metagenomic reads

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Towards the human colorectal cancer microbiome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Fast and accurate short read alignment with Burrows-Wheeler transform

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Influence of fecal sample storage on bacterial community diversity.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

A core gut microbiome in obese and lean twins

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

The TIGRFAMs database of protein families

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

Design and validation of 16S rRNA probes to enumerate members of the Clostridium leptum subgroup in human faecal microbiota.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4997331

A Mathematical Theory of Communication

21 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSREP31731

Method Optimization for Fecal Sample Collection and Fecal DNA Extraction

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27558918

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/SREP31731

1 reference

Dimensions Publication ID

12 September 2017

0 references

1 reference

12 September 2017

1 reference