(Q39547820)

13 September 2017

Global and local indices for characterizing biomolecular flexibility and rigidity (English)

1 reference

13 September 2017

Christopher Pfleger

1

1 reference

13 September 2017

Sebastian Radestock

series ordinal

2

1 reference

13 September 2017

Elena Schmidt

series ordinal

3

1 reference

13 September 2017

Holger Gohlke

series ordinal

4

1 reference

13 September 2017

25 September 2012

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Journal of Computational Chemistry

13 September 2017

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13 September 2017

34

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13 September 2017

220-233

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13 September 2017

3

1 reference

Dynamic personalities of proteins

13 September 2017

1 reference

The complex inter-relationships between protein flexibility and stability

21 January 2018

1 reference

The stability of proteins in extreme environments

21 January 2018

1 reference

Protein rigidity and thermophilic adaptation

21 January 2018

1 reference

A flexible approach for understanding protein stability.

21 January 2018

1 reference

Unifying mechanical and thermodynamic descriptions across the thioredoxin protein family.

21 January 2018

1 reference

Hot spots and transient pockets: predicting the determinants of small-molecule binding to a protein-protein interface

21 January 2018

1 reference

HIV-1 TAR RNA spontaneously undergoes relevant apo-to-holo conformational transitions in molecular dynamics and constrained geometrical simulations.

21 January 2018

1 reference

Flexibility analysis of biomacromolecules with application to computer-aided drug design.

21 January 2018

1 reference

Some like it cold: biocatalysis at low temperatures.

21 January 2018

1 reference

Flexibility and packing in proteins

21 January 2018

1 reference

Topological determinants of protein folding

21 January 2018

1 reference

Small-world view of the amino acids that play a key role in protein folding.

21 January 2018

1 reference

Network analysis of protein dynamics

21 January 2018

1 reference

Uncovering network systems within protein structures.

21 January 2018

1 reference

Side-chain clusters in protein structures and their role in protein folding

21 January 2018

1 reference

Protein flexibility predictions using graph theory

21 January 2018

1 reference

Protein unfolding: rigidity lost

21 January 2018

1 reference

A natural coarse graining for simulating large biomolecular motion

21 January 2018

1 reference

Change in protein flexibility upon complex formation: analysis of Ras-Raf using molecular dynamics and a molecular framework approach.

21 January 2018

1 reference

Network rigidity at finite temperature: relationships between thermodynamic stability, the nonadditivity of entropy, and cooperativity in molecular systems

21 January 2018

1 reference

Sampling protein conformations and pathways

21 January 2018

1 reference

Constrained geometric simulation of diffusive motion in proteins

21 January 2018

1 reference

Multiscale modeling of macromolecular conformational changes combining concepts from rigidity and elastic network theory.

21 January 2018

1 reference

Large-scale comparison of protein essential dynamics from molecular dynamics simulations and coarse-grained normal mode analyses

21 January 2018

1 reference

Thermostability in rubredoxin and its relationship to mechanical rigidity

21 January 2018

1 reference

Statics of the ribosomal exit tunnel: implications for cotranslational peptide folding, elongation regulation, and antibiotics binding

21 January 2018

1 reference

Thermostabilizing mutations preferentially occur at structural weak spots with a high mutation ratio

21 January 2018

1 reference

The distribution and query systems of the RCSB Protein Data Bank

21 January 2018

1 reference

Errors in protein structures

21 January 2018

1 reference

Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation

21 January 2018

1 reference

Protein flexibility using constraints from molecular dynamics simulations.

21 January 2018

1 reference

Automated design of the surface positions of protein helices

21 January 2018

1 reference

Thermostability of salt bridges versus hydrophobic interactions in proteins probed by statistical potentials.

21 January 2018

1 reference

Intermediate states in protein folding

21 January 2018

1 reference

Identification of core amino acids stabilizing rhodopsin

21 January 2018

1 reference

Cluster size diversity, percolation, and complex systems.

21 January 2018

1 reference

Different subdomains are most protected from hydrogen exchange in the molten globule and native states of human alpha-lactalbumin

21 January 2018

1 reference

Hydrogen bond networks determine emergent mechanical and thermodynamic properties across a protein family

21 January 2018

1 reference

Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair

21 January 2018

1 reference

Elucidating protein thermodynamics from the three-dimensional structure of the native state using network rigidity

21 January 2018

1 reference

Analyzing the flexibility of RNA structures by constraint counting

21 January 2018

1 reference

Constraint counting on RNA structures: linking flexibility and function

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/JCC.23122

1 reference

journals/jcc/PflegerRSG13

13 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference