(Q39695666)

14 September 2017

Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation (English)

1 reference

14 September 2017

J D Anderson

1

1 reference

14 September 2017

A Thåström

series ordinal

2

1 reference

14 September 2017

J Widom

series ordinal

3

1 reference

14 September 2017

language of work or name

English

0 references

publication date

1 October 2002

1 reference

Molecular and Cellular Biology

14 September 2017

1 reference

14 September 2017

22

1 reference

14 September 2017

20

1 reference

14 September 2017

7147-7157

1 reference

Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Recruitment of chromatin remodeling machines

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Equilibrium and dynamic nucleosome stability

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Promoter targeting and chromatin remodeling by the SWI/SNF complex

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

ATP-dependent remodeling and acetylation as regulators of chromatin fluidity

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Nucleosome movement by CHRAC and ISWI without disruption or trans-displacement of the histone octamer.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

An engine for nucleosome remodeling

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Alteration of nucleosome structure as a mechanism of transcriptional regulation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Crystal structure of the nucleosome core particle at 2.8 A resolution

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Nucleosome packaging and nucleosome positioning of genomic DNA

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Nucleosome positioning on the MMTV LTR results from the frequency-biased occupancy of multiple frames

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

A positive role for nucleosome mobility in the transcriptional activity of chromatin templates: restriction by linker histones.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Structural features of a phased nucleosome core particle

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Artificial nucleosome positioning sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

DNA and protein determinants of nucleosome positioning on sea urchin 5S rRNA gene sequences in vitro

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Mobile nucleosomes--a general behavior

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Remodeling the chromatin structure of a nucleosome array by transcription factor-targeted trans-displacement of histones.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Structure, dynamics, and function of chromatin in vitro

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Mobility of positioned nucleosomes on 5 S rDNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Chromatin-remodeling factors: machines that regulate?

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Nucleosome positioning and transcription.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=139820

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

20 August 2018

1 reference

12 December 2020

Effects of core histone tail domains on the equilibrium constants for dynamic DNA site accessibility in nucleosomes

1 reference

12 December 2020

The nature of the nucleosomal barrier to transcription: direct observation of paused intermediates by electron cryomicroscopy

1 reference

12 December 2020

Fluctuation driven ratchets: Molecular motors

1 reference

12 December 2020

Polymer reptation and nucleosome repositioning

1 reference

12 December 2020

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

1 reference

12 December 2020

Restriction enzymes as probes of nucleosome stability and dynamics

1 reference

12 December 2020

Mechanism of transcription through the nucleosome by eukaryotic RNA polymerase

1 reference

12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

12 December 2020

A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites

1 reference

12 December 2020

Getting around the nucleosomes

1 reference

12 December 2020

Characterization of nucleosome core particles containing histone proteins made in bacteria

1 reference

12 December 2020

Coupled-enzymatic assays for the rate and mechanism of DNA site exposure in a nucleosome

1 reference

12 December 2020

A specialized nucleosome modulates transcription factor access to a C. glabrata metal responsive promoter

1 reference

12 December 2020

Effects of DNA sequence and histone-histone interactions on nucleosome placement

1 reference

12 December 2020

Effects of histone acetylation on the equilibrium accessibility of nucleosomal DNA target sites

1 reference

12 December 2020

Effects of sequence alterations in a DNA segment containing the 5 S RNA gene from Lytechinus variegatus on positioning of a nucleosome core particle in vitro

1 reference

12 December 2020

10.1128/MCB.22.20.7147-7157.2002

Identifiers

DOI

1 reference

14 September 2017

1 reference

14 September 2017

PubMed publication ID

12242292

1 reference