(Q40019044)

English

Base pairing at the 5' splice site with U1 small nuclear RNA promotes splicing of the upstream intron but may be dispensable for slicing of the downstream intron

scientific article published on June 1996

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scholarly article

1 reference

Europe PubMed Central

16 September 2017

Base pairing at the 5' splice site with U1 small nuclear RNA promotes splicing of the upstream intron but may be dispensable for slicing of the downstream intron (English)

1 reference

Europe PubMed Central

16 September 2017

author name string

Hwang DY

1

1 reference

Europe PubMed Central

16 September 2017

Cohen JB

2

1 reference

Europe PubMed Central

16 September 2017

language of work or name

0 references

publication date

1 June 1996

1 reference

Europe PubMed Central

16 September 2017

Molecular and Cellular Biology

1 reference

Europe PubMed Central

16 September 2017

16

1 reference

Europe PubMed Central

16 September 2017

3012-3022

1 reference

Europe PubMed Central

16 September 2017

6

1 reference

Europe PubMed Central

16 September 2017

Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

The cardiac troponin T alternative exon contains a novel purine-rich positive splicing element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Two different sequence elements within exon 4 are necessary for calcitonin-specific splicing of the human calcitonin/calcitonin gene-related peptide I pre-mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Mutations in the conserved loop of human U5 snRNA generate use of novel cryptic 5' splice sites in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Specific interactions between proteins implicated in splice site selection and regulated alternative splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Protein-protein interactions and 5'-splice-site recognition in mammalian mRNA precursors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Suppression of mammalian 5' splice-site defects by U1 small nuclear RNAs from a distance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

SR proteins promote the first specific recognition of Pre-mRNA and are present together with the U1 small nuclear ribonucleoprotein particle in a general splicing enhancer complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Exon recognition in vertebrate splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

U1 small nuclear RNAs with altered specificity can be stably expressed in mammalian cells and promote permanent changes in pre-mRNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

A subset of SR proteins activates splicing of the cardiac troponin T alternative exon by direct interactions with an exonic enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Dynamic RNA-RNA interactions in the spliceosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

The human splicing factor ASF/SF2 can specifically recognize pre-mRNA 5' splice sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Sequential recognition of the pre-mRNA branch point by U2AF65 and a novel spliceosome-associated 28-kDa protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Production of single-stranded plasmid DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Alternative processing of bovine growth hormone mRNA is influenced by downstream exon sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Nuclear pre-mRNA splicing in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Adenovirus VAI-RNA regulates gene expression by controlling stability of ribosome-bound RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Exon definition may facilitate splice site selection in RNAs with multiple exons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Selection of splice sites in pre-mRNAs with short internal exons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Biochemical Mechanisms of Constitutive and Regulated Pre-mRNA Splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

SR proteins: a conserved family of pre-mRNA splicing factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

22 September 2017

Association of U6 snRNA with the 5'-splice site region of pre-mRNA in the spliceosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

25 September 2017

A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

25 September 2017

U1 snRNA promotes the selection of nearby 5' splice sites by U6 snRNA in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

25 September 2017

A splicing enhancer complex controls alternative splicing of doublesex pre-mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

A point mutation in the last intron responsible for increased expression and transforming activity of the c-Ha-ras oncogene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

5' splice site selection in yeast: genetic alterations in base-pairing with U1 reveal additional requirements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Scanning from an independently specified branch point defines the 3' splice site of mammalian introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Expression of the H-ras proto-oncogene is controlled by alternative splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Exon mutations uncouple 5' splice site selection from U1 snRNA pairing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Regulation of sex-specific RNA splicing at the Drosophila doublesex gene: cis-acting mutations in exon sequences alter sex-specific RNA splicing patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Control of doublesex alternative splicing by transformer and transformer-2 in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Positive control of pre-mRNA splicing in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

Mutations in U6 snRNA that alter splice site specificity: implications for the active site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

17 June 2018

The role of exon sequences in splice site selection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231296

20 August 2018

U5 snRNA interacts with exon sequences at 5′ and 3′ splice sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions of small nuclear RNA's with precursor messenger RNA during in vitro splicing

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of Alternative Splicing by the Differential Binding of U1 Small Nuclear Ribonucleoprotein Particle

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutations in yeast U5 snRNA alter the specificity of 5' splice-site cleavage

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Site-specific cross-linking of mammalian U5 snRNP to the 5' splice site before the first step of pre-mRNA splicing

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

U1 snRNP targets an essential splicing factor, U2AF65, to the 3' splice site by a network of interactions spanning the exon

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A splicing enhancer in the human fibronectin alternate ED1 exon interacts with SR proteins and stimulates U2 snRNP binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The U5 and U6 small nuclear RNAs as active site components of the spliceosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Involvement of U6 snRNA in 5' splice site selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complementation by SR proteins of pre-mRNA splicing reactions depleted of U1 snRNP

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

5' cleavage site in eukaryotic pre-mRNA splicing is determined by the overall 5' splice region, not by the conserved 5' GU

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SR proteins can compensate for the loss of U1 snRNP functions in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/8649413

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.16.6.3012

1 reference

Europe PubMed Central

16 September 2017

1 reference

Europe PubMed Central

16 September 2017

1 reference

Europe PubMed Central

16 September 2017

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