(Q40171959)

English

Development and application of a dapB-based in vivo expression technology system to study colonization of rice by the endophytic nitrogen-fixing bacterium Pseudomonas stutzeri A15.

scientific article published on November 2003

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scholarly article

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

Development and application of a dapB-based in vivo expression technology system to study colonization of rice by the endophytic nitrogen-fixing bacterium Pseudomonas stutzeri A15 (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

Pseudomonas stutzeri

object named as

Pseudomonas stutzeri

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

1

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

author name string

Victoria Bonnecarrère

2

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20 December 2019

Kelly Hamonts

4

1 reference

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20 December 2019

Jos Vanderleyden

5

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20 December 2019

René De Mot

6

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20 December 2019

language of work or name

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publication date

1 November 2003

1 reference

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20 December 2019

Applied and Environmental Microbiology

1 reference

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20 December 2019

69

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20 December 2019

11

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20 December 2019

6864-6874

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

Use of In-Biofilm Expression Technology To Identify Genes Involved in Pseudomonas aeruginosa Biofilm Development

1 reference

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STRING: a database of predicted functional associations between proteins

1 reference

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22 September 2017

MBGD: microbial genome database for comparative analysis

1 reference

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Structure, mechanism and regulation of peroxiredoxins

1 reference

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Seeking a niche: putative contributions of the hfq and bacA gene products to the successful adaptation of the brucellae to their intracellular home.

1 reference

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22 September 2017

Selection of Shigella flexneri candidate virulence genes specifically induced in bacteria resident in host cell cytoplasm

1 reference

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22 September 2017

New insights into the regulation and functional significance of lysine metabolism in plants

1 reference

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22 September 2017

Proteomic analysis reveals differential protein expression by Bacillus cereus during biofilm formation

1 reference

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tRNA is the source of low-level trans-zeatin production in Methylobacterium spp.

1 reference

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22 September 2017

Identification and testing of Porphyromonas gingivalis virulence genes with a pPGIVET system

1 reference

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22 September 2017

Identification of genes induced in vivo during Klebsiella pneumoniae CG43 infection

1 reference

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22 September 2017

Improvement of reading frame maintenance is a common function for several tRNA modifications

1 reference

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22 September 2017

Metabolic context and possible physiological themes of sigma(54)-dependent genes in Escherichia coli

1 reference

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22 September 2017

DNA microarray-based identification of genes controlled by autoinducer 2-stimulated quorum sensing in Escherichia coli

1 reference

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22 September 2017

Modification of the protein expression pattern induced in the nitrogen-fixing actinomycete Frankia sp. strain ACN14a-tsr by root exudates of its symbiotic host Alnus glutinosa and cloning of the sodF gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Hfq is necessary for regulation by the untranslated RNA DsrA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Adaptation of Pseudomonas fluorescens to the plant rhizosphere

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Involvement of acetyl phosphate in the in vivo activation of the response regulator ComA in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

In vivo expression technology strategies: valuable tools for biotechnology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Genes expressed in Pseudomonas putida during colonization of a plant-pathogenic fungus

1 reference

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22 September 2017

Thioredoxin-dependent hydroperoxide peroxidase activity of bacterioferritin comigratory protein (BCP) as a new member of the thiol-specific antioxidant protein (TSA)/Alkyl hydroperoxide peroxidase C (AhpC) family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

In vivo genetic analysis of bacterial virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Structure/function studies on enzymes in the diaminopimelate pathway of bacterial cell wall biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Bacterial genes induced within the nodule during the Rhizobium-legume symbiosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Genes coding for phosphotransacetylase and acetate kinase in Sinorhizobium meliloti are in an operon that is inducible by phosphate stress and controlled by phoB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Strategies for isolation of in vivo expressed genes from bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Identification and cloning of an Erwinia carotovora subsp. carotovora bacteriocin regulator gene by insertional mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Contribution of the Pmra promoter to expression of genes in the Escherichia coli mra cluster of cell envelope biosynthesis and cell division genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Promoter characterization and constitutive expression of the Escherichia coli gcvR gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Identification of novel staphylococcal virulence genes by in vivo expression technology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

yst gene expression in Yersinia enterocolitica is positively regulated by a chromosomal region that is highly homologous to Escherichia coli host factor 1 gene (hfq).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Transcription of the mutL repair, miaA tRNA modification, hfq pleiotropic regulator, and hflA region protease genes of Escherichia coli K-12 from clustered Esigma32-specific promoters during heat shock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Use of recombinase gene fusions to identify Vibrio cholerae genes induced during infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Large-scale isolation of candidate virulence genes of Pseudomonas aeruginosa by in vivo selection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Structure and regulation of the carAB operon in Pseudomonas aeruginosa and Pseudomonas stutzeri: no untranslated region exists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Nucleotide sequence of the rpoN gene and characterization of two downstream open reading frames in Pseudomonas aeruginosa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

22 September 2017

In a class of its own--the RNA polymerase sigma factor sigma 54 (sigma N).

1 reference

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22 September 2017

Structure-function relationship of bacterial prolipoprotein diacylglyceryl transferase: functionally significant conserved regions

1 reference

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Soluble aldehyde dehydrogenase and metabolism of aldehydes by soybean bacteroids.

1 reference

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Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors

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Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria

1 reference

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Applying in vivo expression technology (IVET) to the fungal pathogen Histoplasma capsulatum

1 reference

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25 September 2017

IVET and RIVET: use of gene fusions to identify bacterial virulence factors specifically induced in host tissues.

1 reference

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15 June 2018

The use of listeriolysin to identify in vivo induced genes in the gram-positive intracellular pathogen Listeria monocytogenes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

15 June 2018

The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

15 June 2018

Cloning, sequence analysis, expression and inactivation of the Corynebacterium glutamicum pta-ack operon encoding phosphotransacetylase and acetate kinase

1 reference

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15 June 2018

Use of signature-tagged transposon mutagenesis to identify Vibrio cholerae genes critical for colonization.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262291

15 June 2018

Identification of novel chromosomal loci affecting Yersinia enterocolitica pathogenesis

1 reference

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15 June 2018

Mutations in genes downstream of the rpoN gene (encoding sigma 54) of Klebsiella pneumoniae affect expression from sigma 54-dependent promoters

1 reference

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15 June 2018

THE OXIDATIVE BURST IN PLANT DISEASE RESISTANCE.

1 reference

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20 August 2018

Genes encoding a cellulosic polymer contribute toward the ecological success of Pseudomonas fluorescens SBW25 on plant surfaces

1 reference

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20 August 2018

Evidence that acetyl phosphate functions as a global signal during biofilm development

1 reference

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20 August 2018

Rice seedling whole exudates and extracted alkylresorcinols induce stress-response in Escherichia coli biosensors.

1 reference

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20 August 2018

Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440.

1 reference

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20 August 2018

Pathway of CH4 formation in anoxic rice field soil and rice roots determined by 13C-stable isotope fractionation

1 reference

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1 reference

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1 reference

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20 August 2018

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1 reference

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20 August 2018

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1 reference

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20 August 2018

Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602651

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulatory interactions between the Pho and sigma(B)-dependent general stress regulons of Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602651

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transfer RNA modification, temperature and DNA superhelicity have a common target in the regulatory network of the virulence of Shigella flexneri: the expression of the virF gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602651

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phosphotransacetylase associated with the pyruvate dehydrogenase complex from the nitrogen fixing Azotobacter vinelandii

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602651

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of in vivo induced genes in Actinobacillus pleuropneumoniae

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602651

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biosynthesis of lysine in plants: the putative role of meso-diaminopimelate dehydrogenase

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602651

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.69.11.6864-6874.2003

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602651%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

ResearchGate publication ID

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