(Q40216502)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

title

Sequence-dependent DNA curvature and flexibility from scanning force microscopy images (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

author name string

Anita Scipioni

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

Claudio Anselmi

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

Bruno Samori

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

Pasquale De Santis

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

language of work or name

English

0 references

publication date

1 November 2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

volume

83

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

issue

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

page(s)

2408-2418

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

Bent helical structure in kinetoplast DNA.

14 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Mapping the intrinsic curvature and flexibility along the DNA chain.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Global structure and mechanical properties of a 10-bp nucleosome positioning motif

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

A theoretical model for the prediction of sequence-dependent nucleosome thermodynamic stability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

DNA curvature and deformation in protein-DNA complexes: a step in the right direction

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

DNA sequence-dependent deformability deduced from protein-DNA crystal complexes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Measurement of the DNA bend angle induced by the catabolite activator protein using Monte Carlo simulation of cyclization kinetics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Characterization of the ATF/CREB site and its complex with GCN4.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Scanning force microscopy of DNA deposited onto mica: equilibration versus kinetic trapping studied by statistical polymer chain analysis.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

DNA binding to mica correlates with cationic radius: assay by atomic force microscopy

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Sequence-dependent deformational anisotropy of chromatin DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

The locus of sequence-directed and protein-induced DNA bending

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

DNA bending at adenine . thymine tracts

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Calibration of DNA curvature and a unified description of sequence-directed bending

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Circular DNA molecules imaged in air by scanning force microscopy

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

DNA methylation can enhance or induce DNA curvature

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

CTG repeats associated with human genetic disease are inherently flexible

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Sequence dependence of the curvature of DNA: a test of the phasing hypothesis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Theory of gel electrophoresis of DNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Ring closure probabilities for DNA fragments by Monte Carlo simulation.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

A theoretical model of DNA curvature.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Understanding the anomalous electrophoresis of bent DNA molecules: a reptation model

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Sequence-dependent elastic properties of DNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Static curvature and flexibility measurements of DNA with microscopy. A simple renormalization method, its assessment by experiment and simulation.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Anomalous rapid electrophoretic mobility of DNA containing triplet repeats associated with human disease genes.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Influence of fluctuations on DNA curvature. A comparison of flexible and static wedge models of intrinsically bent DNA.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Determination of DNA persistence length by cryo-electron microscopy. Separation of the static and dynamic contributions to the apparent persistence length of DNA.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Polymer chain statistics and conformational analysis of DNA molecules with bends or sections of different flexibility

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302329

Dual role of DNA intrinsic curvature and flexibility in determining nucleosome stability

2 December 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

From the sequence to the superstructural properties of DNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

Periodical polydeoxynucleotides and DNA curvature

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

Validity of the nearest-neighbor approximation in the evaluation of the electrophoretic manifestations of DNA curvature

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

Sequence-directed curvature of DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

An optimized potential function for the calculation of nucleic acid interaction energies I. base stacking

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

7 January 2021

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975254-5

inferred from DOI database lookup

7 January 2021

based on heuristic

Molecular modeling of closed circular DNA thermodynamic ensembles

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12414677

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(02)75254-5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12414677%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

PubMed publication ID

12414677

1 reference