(Q40266196)

English

Tethering sigma70 to RNA polymerase reveals high in vivo activity of sigma factors and sigma70-dependent pausing at promoter-distal locations

scientific article published on November 2003

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scholarly article

1 reference

Europe PubMed Central

19 September 2017

Tethering sigma70 to RNA polymerase reveals high in vivo activity of sigma factors and sigma70-dependent pausing at promoter-distal locations (English)

1 reference

Europe PubMed Central

19 September 2017

2

object named as

Robert Landick

1 reference

Europe PubMed Central

19 September 2017

author name string

Rachel Anne Mooney

1

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Europe PubMed Central

19 September 2017

language of work or name

1 reference

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publication date

1 November 2003

1 reference

Europe PubMed Central

19 September 2017

Genes & Development

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Europe PubMed Central

19 September 2017

17

1 reference

Europe PubMed Central

19 September 2017

22

1 reference

Europe PubMed Central

19 September 2017

2839-2851

1 reference

Europe PubMed Central

19 September 2017

Binding of sigma(A) and sigma(B) to core RNA polymerase after environmental stress in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

The transcription cycle of RNA polymerase II in living cells.

1 reference

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22 September 2017

Regulation of sigma factor competition by the alarmone ppGpp

1 reference

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22 September 2017

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

1 reference

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22 September 2017

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

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22 September 2017

Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo

1 reference

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22 September 2017

Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex

1 reference

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22 September 2017

Macromolecular crowding: obvious but underappreciated

1 reference

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22 September 2017

Translocation of sigma(70) with RNA polymerase during transcription: fluorescence resonance energy transfer assay for movement relative to DNA.

1 reference

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22 September 2017

Restructuring of an RNA polymerase holoenzyme elongation complex by lambdoid phage Q proteins

1 reference

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22 September 2017

Functional modulation of Escherichia coli RNA polymerase

1 reference

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22 September 2017

Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase

1 reference

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22 September 2017

6S RNA regulates E. coli RNA polymerase activity

1 reference

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22 September 2017

The interface of sigma with core RNA polymerase is extensive, conserved, and functionally specialized

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Interactions of Escherichia coli sigma(70) within the transcription elongation complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

The functional and regulatory roles of sigma factors in transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Replacement of vegetative sigmaA by sporulation-specific sigmaF as a component of the RNA polymerase holoenzyme in sporulating Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Negative regulation by RpoS: a case of sigma factor competition

1 reference

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22 September 2017

Optimizing the stability of single-chain proteins by linker length and composition mutagenesis

1 reference

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22 September 2017

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

SigmaE is an essential sigma factor in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Domain organization of the Escherichia coli RNA polymerase sigma 70 subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Single-chain Fvs.

1 reference

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22 September 2017

Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Studies on the selectivity of DNA precipitation by spermine

1 reference

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22 September 2017

Rate-limiting steps in RNA chain initiation

1 reference

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22 September 2017

Isolation and characterization of Escherichia coli mutants that lack the heat shock sigma factor sigma 32.

1 reference

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22 September 2017

The Salmonella typhimurium his operon leader region contains an RNA hairpin-dependent transcription pause site. Mechanistic implications of the effect on pausing of altered RNA hairpins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

A mutant sigma 32 with a small deletion in conserved region 3 of sigma has reduced affinity for core RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

How a mutation in the gene encoding sigma 70 suppresses the defective heat shock response caused by a mutation in the gene encoding sigma 32.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

22 September 2017

Kinetic studies and structural models of the association of E. coli sigma(70) RNA polymerase with the lambdaP(R) promoter: large scale conformational changes in forming the kinetically significant intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

Sigma competition: the contest between bacteriophage T4 middle and late transcription

1 reference

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17 June 2018

Identification of a contact site for different transcription activators in region 4 of the Escherichia coli RNA polymerase sigma70 subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

Promoter selectivity of the Bacillus subtilis RNA polymerase sigmaA and sigmaH holoenzymes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

Function of E. coli RNA polymerase sigma factor sigma 70 in promoter-proximal pausing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

A random flight chain model for the tether of the Shaker K+ channel inactivation domain

1 reference

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17 June 2018

Factor Stimulating Transcription by RNA Polymerase

1 reference

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17 June 2018

RNA chain initiation by Escherichia coli RNA polymerase. Structural transitions of the enzyme in early ternary complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

Release of the sigma subunit of Escherichia coli DNA-dependent RNA polymerase depends mainly on time elapsed after the start of initiation, not on length of product RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

Escherichia coli sigma 70 and NusA proteins. I. Binding interactions with core RNA polymerase in solution and within the transcription complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

17 June 2018

The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

20 August 2018

Generality of the branched pathway in transcription initiation by Escherichia coli RNA polymerase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

20 August 2018

Biophysical compensation mechanisms buffering E. coli protein-nucleic acid interactions against changing environments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

20 August 2018

Tethering of the large subunits of Escherichia coli RNA polymerase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

20 August 2018

In vivo thermodynamic analysis of repression with and without looping in lac constructs. Estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo.

1 reference

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20 August 2018

A hybrid sigma subunit directs RNA polymerase to a hybrid promoter in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

20 August 2018

Transcription termination in Escherichia coli. Measurement of the rate of enzyme release from Rho-independent terminators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

20 August 2018

Isolation and characterization of sigma(70)-retaining transcription elongation complexes from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=280631

4 November 2018

Altering the level and regulation of the major sigma subunit of RNA polymerase affects gene expression and development in Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

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1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

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Function of transcription cleavage factors GreA and GreB at a regulatory pause site

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

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Conformational transition of Escherichia coli RNA polymerase induced by the interaction of sigma subunit with core enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

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Cooperative effects of bacterial mutations affecting lambda N gene expression. I. Isolation and characterization of a nusB mutant

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

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Transcription from a heat-inducible promoter causes heat shock regulation of the sigma subunit of E. coli RNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The heat shock response of E. coli is regulated by changes in the concentration of σ32

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/14630944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GAD.1142203

1 reference

Europe PubMed Central

19 September 2017

1 reference

Europe PubMed Central

19 September 2017

1 reference

Europe PubMed Central

19 September 2017

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