(Q40336901)

19 September 2017

Effect of flanking residues on the conformational sampling of the internal fusion peptide from Ebola virus (English)

1 reference

19 September 2017

Orthoebolavirus zairense

0 references

author name string

Adam J Jaskierny

series ordinal

1

1 reference

19 September 2017

Afra Panahi

series ordinal

2

1 reference

19 September 2017

Michael Feig

series ordinal

3

1 reference

19 September 2017

language of work or name

English

0 references

publication date

18 January 2011

1 reference

19 September 2017

1 reference

19 September 2017

79

1 reference

19 September 2017

4

1 reference

19 September 2017

1109-1117

1 reference

The complete influenza hemagglutinin fusion domain adopts a tight helical hairpin arrangement at the lipid:water interface

19 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Effect of membrane thickness on conformational sampling of phospholamban from computer simulations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

13C-13C correlation spectroscopy of membrane-associated influenza virus fusion peptide strongly supports a helix-turn-helix motif and two turn conformations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

CHARMM: the biomolecular simulation program

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Structure of the Ebola fusion peptide in a membrane-mimetic environment and the interaction with lipid rafts

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Balancing solvation and intramolecular interactions: toward a consistent generalized Born force field

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Fusion peptide of influenza hemagglutinin requires a fixed angle boomerang structure for activity

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Roles of a conserved proline in the internal fusion peptide of Ebola glycoprotein

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

An Implicit Membrane Generalized Born Theory for the Study of Structure, Stability, and Interactions of Membrane Proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Membrane fusion activity of vesicular stomatitis virus glycoprotein G is induced by low pH but not by heat or denaturant

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Calcium-dependent conformational changes of membrane-bound Ebola fusion peptide drive vesicle fusion

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

The trimer-of-hairpins motif in membrane fusion: Visna virus

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

The Fusion glycoprotein shell of Semliki Forest virus: an icosahedral assembly primed for fusogenic activation at endosomal pH

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Implicit solvent model studies of the interactions of the influenza hemagglutinin fusion peptide with lipid bilayers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Mutational analysis of the putative fusion domain of Ebola virus glycoprotein.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

New Monte Carlo algorithms for protein folding.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Core structure of the envelope glycoprotein GP2 from Ebola virus at 1.9-A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Phosphatidylinositol-dependent membrane fusion induced by a putative fusogenic sequence of Ebola virus

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Molecular biology and evolution of filoviruses.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Structure of the haemagglutinin membrane glycoprotein of influenza virus at 3 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Conformational sampling of influenza fusion peptide in membrane bilayers as a function of termini and protonation states

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

A generalized Born formalism for heterogeneous dielectric environments: application to the implicit modeling of biological membranes

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Implicit solvation based on generalized Born theory in different dielectric environments

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Improved treatment of the protein backbone in empirical force fields.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Influence of proline residues in transmembrane helix packing.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

New analytic approximation to the standard molecular volume definition and its application to generalized Born calculations.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Membrane structure of the human immunodeficiency virus gp41 fusion peptide by molecular dynamics simulation. II. The glycine mutants

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3075865

Replica-exchange molecular dynamics method for protein folding

20 August 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22947

THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22947

Molecular dynamics simulations of large integral membrane proteins with an implicit membrane model

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22947

Implicit solvent simulations of DNA and DNA-protein complexes: agreement with explicit solvent vs experiment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22947

Configuration of influenza hemagglutinin fusion peptide monomers and oligomers in membranes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22947

Balancing an accurate representation of the molecular surface in generalized born formalisms with integrator stability in molecular dynamics simulations

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21246633

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetics from Implicit Solvent Simulations of Biomolecules as a Function of Viscosity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21246633

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PROT.22947

1 reference

19 September 2017

1 reference

19 September 2017

PubMed publication ID

21246633

1 reference