(Q40402552)

English

Both high mobility group (HMG)-boxes and the acidic tail of HMGB1 regulate recombination-activating gene (RAG)-mediated recombination signal synapsis and cleavage in vitro

scientific article published on July 2005

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

Both high mobility group (HMG)-boxes and the acidic tail of HMGB1 regulate recombination-activating gene (RAG)-mediated recombination signal synapsis and cleavage in vitro (English)

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

author name string

Serge Bergeron

1

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

Tina Madathiparambil

2

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

Patrick C Swanson

3

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

language of work or name

0 references

publication date

1 July 2005

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

Journal of Biological Chemistry

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

280

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

35

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

31314-31324

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

The bounty of RAGs: recombination signal complexes and reaction outcomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Full-length RAG-2, and Not Full-length RAG-1, Specifically Suppresses RAG-mediated Transposition but Not Hybrid Joint Formation or Disintegration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Regulation of V(D)J recombination by nucleosome positioning at recombination signal sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The DNA-bending protein HMGB1 is a cellular cofactor of Sleeping Beauty transposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

A RAG-1/RAG-2 tetramer supports 12/23-regulated synapsis, cleavage, and transposition of V(D)J recombination signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The DNA architectural protein HMGB1 displays two distinct modes of action that promote enhanceosome assembly.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The mechanism and regulation of chromosomal V(D)J recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Hairpin opening and overhang processing by an Artemis/DNA-dependent protein kinase complex in nonhomologous end joining and V(D)J recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Fine structure and activity of discrete RAG-HMG complexes on V(D)J recombination signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

HMG1 and 2, and related 'architectural' DNA-binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The DDE motif in RAG-1 is contributed in trans to a single active site that catalyzes the nicking and transesterification steps of V(D)J recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

A role of basic residues and the putative intercalating phenylalanine of the HMG-1 box B in DNA supercoiling and binding to four-way DNA junctions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Mechanism for specificity by HMG-1 in enhanceosome assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

A highly ordered structure in V(D)J recombination cleavage complexes is facilitated by HMG1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The RAG1 homeodomain recruits HMG1 and HMG2 to facilitate recombination signal sequence binding and to enhance the intrinsic DNA-bending activity of RAG1-RAG2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Regulation of DNA-dependent activities by the functional motifs of the high-mobility-group chromosomal proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

RAG-2 promotes heptamer occupancy by RAG-1 in the assembly of a V(D)J initiation complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Accessibility of nucleosomal DNA to V(D)J cleavage is modulated by RSS positioning and HMG1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

V(D)J recombination signal recognition: distinct, overlapping DNA-protein contacts in complexes containing RAG1 with and without RAG2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

High-mobility group chromatin proteins 1 and 2 functionally interact with steroid hormone receptors to enhance their DNA binding in vitro and transcriptional activity in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

High mobility group protein-1 (HMG-1) is a unique activator of p53

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

RAG-1 and RAG-2-dependent assembly of functional complexes with V(D)J recombination substrates in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

High mobility group chromosomal protein 1 binds to the adeno-associated virus replication protein (Rep) and promotes Rep-mediated site-specific cleavage of DNA, ATPase activity and transcriptional repression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Stimulation of V(D)J cleavage by high mobility group proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Characterization of broken DNA molecules associated with V(D)J recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The DNA-bending protein HMG-1 enhances progesterone receptor binding to its target DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

The high mobility group protein HMG1 can reversibly inhibit class II gene transcription by interaction with the TATA-binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

22 June 2018

Acidic C-tail of HMGB1 is required for its target binding to nucleosome linker DNA and transcription stimulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

20 August 2018

Recognition of DNA interstrand cross-link of antitumor cisplatin by HMGB1 protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

20 August 2018

The effect of the acidic tail on the DNA-binding properties of the HMG1,2 class of proteins: insights from tail switching and tail removal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

20 August 2018

Structure-specific binding of the two tandem HMG boxes of HMG1 to four-way junction DNA is mediated by the A domain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

20 August 2018

Similarities between initiation of V(D)J recombination and retroviral integration.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

20 August 2018

Cleavage at a V(D)J recombination signal requires only RAG1 and RAG2 proteins and occurs in two steps.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5992625

20 August 2018

The Long Acidic Tail of High Mobility Group Box 1 (HMGB1) Protein Forms an Extended and Flexible Structure That Interacts with Specific Residues within and between the HMG Boxes†

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M503063200

21 January 2018

Domain-domain interactions in high mobility group 1 protein (HMG1)

1 reference

https://pubmed.ncbi.nlm.nih.gov/15994314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

V(D)J recombination: broken DNA molecules with covalently sealed (hairpin) coding ends in scid mouse thymocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15994314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA bending by the chromosomal protein HMG1 and its high mobility group box domains. Effect of flanking sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/15994314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Double-strand signal sequence breaks in V(D)J recombination are blunt, 5'-phosphorylated, RAG-dependent, and cell cycle regulated

1 reference

https://pubmed.ncbi.nlm.nih.gov/15994314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differences in the DNA-Binding Properties of the Hmg-Box Domains of HMG1 and the Sex-Determining Factor SRY

1 reference

https://pubmed.ncbi.nlm.nih.gov/15994314

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M503063200

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 June 2018

http://europepmc.org/abstract/PMC/5992625

ResearchGate publication ID

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