(Q40409111)

20 September 2017

RNA hairpin loop stability depends on closing base pair (English)

1 reference

20 September 2017

M J Serra

1

1 reference

20 September 2017

M H Lyttle

2

1 reference

20 September 2017

T J Axenson

3

1 reference

20 September 2017

C A Schadt

4

1 reference

20 September 2017

D H Turner

5

1 reference

20 September 2017

1 August 1993

1 reference

20 September 2017

Nucleic Acids Research

1 reference

20 September 2017

21

1 reference

20 September 2017

16

1 reference

20 September 2017

3845-3849

1 reference

Free energy of imperfect nucleic acid helices. II. Small hairpin loops

20 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Improved Estimation of Secondary Structure in Ribonucleic Acids

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Influence of loop residues on the relative stabilities of DNA hairpin structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

A Compilation of large subunit RNA sequences presented in a structural format

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Characterization of RNA hairpin loop stability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Improved predictions of secondary structures for RNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

On finding all suboptimal foldings of an RNA molecule

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

22 September 2017

RNA structure prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Improved free-energy parameters for predictions of RNA duplex stability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Enzymatic and NMR analysis of oligoribonucleotides synthesized with 2'-tert-butyldimethylsilyl protected cyanoethylphosphoramidite monomers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops"

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

A thermodynamic study of unusually stable RNA and DNA hairpins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Thermodynamic parameters for loop formation in RNA and DNA hairpin tetraloops

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Polymer-supported RNA synthesis and its application to test the nearest-neighbor model for duplex stability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=309905

Stability of RNA hairpin loops: A6-Cm-U6

17 June 2018

1 reference

12 December 2020

Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp

1 reference

12 December 2020

Contributions of dangling end stacking and terminal base-pair formation to the stabilities of XGGCCp, XCCGGp, XGGCCYp, and XCCGGYp helixes

1 reference

12 December 2020

Free energy contributions of G.U and other terminal mismatches to helix stability

1 reference

12 December 2020

Stabilities of consecutive A.C, C.C, G.G, U.C, and U.U mismatches in RNA internal loops: Evidence for stable hydrogen-bonded U.U and C.C.+ pairs

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/21.16.3845

1 reference

release_26b6shv3vzb6bnxs5kakwkaewm

20 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/26b6shv3vzb6bnxs5kakwkaewm

24 November 2022

mapped directly with Wikidata item

1 reference

20 September 2017

PubMed publication ID

7690127

1 reference