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English
Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C and G-ending codons.
scientific article published on November 1993
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scholarly article
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stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
title
Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C and G-ending codons
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
main subject
maize
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based on heuristic
inferred from title
author
Julia Bailey-Serres
series ordinal
2
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Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
author name string
S L Fennoy
series ordinal
1
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stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
language of work or name
English
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publication date
1 November 1993
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stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
published in
Nucleic Acids Research
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stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
volume
21
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
issue
23
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
page(s)
5294-5300
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
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Codon usage in bacteria: correlation with gene expressivity
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Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
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Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type.
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Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons
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Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes
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Intron conservation across the prokaryote-eukaryote boundary: structure of the nuclear gene for chloroplast glyceraldehyde-3-phosphate dehydrogenase from maize
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High-level expression of sperm whale myoglobin in Escherichia coli
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"Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons
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Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases
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Design, synthesis and expression of a human interleukin-2 gene incorporating the codon usage bias found in highly expressed Escherichia coli genes
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The isochore organization and the compositional distribution of homologous coding sequences in the nuclear genome of plants
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Codon usage and gene expression level in Dictyostelium discoideum: highly expressed genes do 'prefer' optimal codons
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Expression of tetanus toxin fragment C in E. coli: high level expression by removing rare codons
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Strong functional GC pressure in a light-regulated maize gene encoding subunit GAPA of chloroplast glyceraldehyde-3-phosphate dehydrogenase: implications for the evolution of GAPA pseudogenes
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Gene distribution and isochore organization in the nuclear genome of plants
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22 September 2017
Role of GC-biased mutation pressure on synonymous codon choice in Micrococcus luteus, a bacterium with a high genomic GC-content
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22 September 2017
Chloroplast genes transferred to the nuclear plant genome have adjusted to nuclear base composition and codon usage.
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Codon preferences in free-living microorganisms
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22 September 2017
The 'effective number of codons' used in a gene
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Modification of the coding sequence enhances plant expression of insect control protein genes
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22 September 2017
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22 September 2017
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22 September 2017
Different effects of intron nucleotide composition and secondary structure on pre-mRNA splicing in monocot and dicot plants
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25 September 2017
Unmethylated CpG islands associated with genes in higher plant DNA.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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25 September 2017
Endosymbiotic origin and codon bias of the nuclear gene for chloroplast glyceraldehyde-3-phosphate dehydrogenase from maize
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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25 September 2017
Structure, evolution and anaerobic regulation of a nuclear gene encoding cytosolic glyceraldehyde-3-phosphate dehydrogenase from maize
1 reference
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15 June 2018
Analysis of seed storage protein genes of oats
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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15 June 2018
Codon usage in Aspergillus nidulans
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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15 June 2018
Unusual codon bias occurring within insertion sequences in Escherichia coli
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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15 June 2018
Codon usage in the G+C-rich Streptomyces genome
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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15 June 2018
Evaluation of foreign gene codon optimization in yeast: expression of a mouse IG kappa chain
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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15 June 2018
Codon usage in higher plants, green algae, and cyanobacteria.
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310561
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20 August 2018
Codon usage determines translation rate in Escherichia coli
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/8265340
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
An apparent rare-codon effect on the rate of translation of a Neurospora gene
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/8265340
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Evidence for the translational control of storage protein gene expression in oat seeds
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/8265340
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/21.23.5294
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
PMC publication ID
310561
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
PubMed publication ID
8265340
1 reference
stated in
Europe PubMed Central
PMC publication ID
310561
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8265340%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 October 2019
ResearchGate publication ID
14934633
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