(Q40503600)

21 September 2017

title

De novo RNA synthesis and homology modeling of the classical swine fever virus RNA polymerase (English)

1 reference

21 September 2017

main subject

classical swine fever

1 reference

classical swine fever virus

inferred from title

object named as

classical swine fever virus

1 reference

Pengwei Zhang

1

1 reference

21 September 2017

Jian Xie

2

1 reference

21 September 2017

Guanghui Yi

3

1 reference

21 September 2017

Chuyu Zhang

4

1 reference

21 September 2017

Rong Zhou

5

1 reference

21 September 2017

language of work or name

1 reference

15 April 2005

1 reference

21 September 2017

1 reference

21 September 2017

volume

112

1 reference

21 September 2017

issue

1-2

1 reference

21 September 2017

page(s)

9-23

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

21 September 2017

1 reference

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

CDD: a database of conserved domain alignments with links to domain three-dimensional structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

PROSITE: a dictionary of sites and patterns in proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Structural Analysis of the Hepatitis C Virus RNA Polymerase in Complex with Ribonucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Comparative analysis of seven multiple protein sequence alignment servers: clues to enhance reliability of predictions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

A mechanism for initiating RNA-dependent RNA polymerization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Molecular cloning and nucleotide sequence of the pestivirus bovine viral diarrhea virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

JPred: a consensus secondary structure prediction server

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

An attempt to unify the structure of polymerases

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Chimeric (marker) C-strain viruses induce clinical protection against virulent classical swine fever virus (CSFV) and reduce transmission of CSFV between vaccinated pigs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

VERIFY3D: assessment of protein models with three-dimensional profiles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Pestivirus internal ribosome entry site (IRES) structure and function: elements in the 5' untranslated region important for IRES function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Assessing protein structures with a non-local atomic interaction energy.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Computer simulation of protein motion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Structure of the RNA-dependent RNA polymerase of poliovirus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

CLUSTAL: a package for performing multiple sequence alignment on a microcomputer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Oligomeric structures of poliovirus polymerase are important for function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

A novel mechanism to ensure terminal initiation by hepatitis C virus NS5B polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Compilation and alignment of DNA polymerase sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

A comprehensive comparison of multiple sequence alignment programs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Primary structural comparison of RNA-dependent polymerases from plant, animal and bacterial viruses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

De novo initiation of RNA synthesis by a recombinant flaviviridae RNA-dependent RNA polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Template requirements for RNA synthesis by a recombinant hepatitis C virus RNA-dependent RNA polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

De novo initiation of viral RNA-dependent RNA synthesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Hidden Markov models for detecting remote protein homologies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Closing in on HIV drug resistance.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

PROCHECK: a program to check the stereochemical quality of protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Enhanced genome annotation using structural profiles in the program 3D-PSSM

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Extreme resistance to potato virus X infection in plants expressing a modified component of the putative viral replicase.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Characterisation of the RNA-dependent RNA polymerase from Rabbit hemorrhagic disease virus produced in Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

De novo initiation of RNA synthesis by the RNA-dependent RNA polymerase (NS5B) of hepatitis C virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Inhibition of HIV-1 Replication by a Nonnucleoside Reverse Transcriptase Inhibitor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

A model to estimate the financial consequences of classical swine fever outbreaks: principles and outcomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Molecular targets for AIDS therapy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Crystal structures of active and inactive conformations of a caliciviral RNA-dependent RNA polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

De Novo Synthesis of Negative-Strand RNA by Dengue Virus RNA-Dependent RNA Polymerase In Vitro: Nucleotide, Primer, and Template Parameters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

A recombinant hepatitis C virus RNA-dependent RNA polymerase capable of copying the full-length viral RNA.

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

12 December 2020

Analysis of RNA-dependent RNA polymerase structure and function as guided by known polymerase structures and computer predictions of secondary structure

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Requirements for De Novo Initiation of RNA Synthesis by Recombinant Flaviviral RNA-Dependent RNA Polymerases

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

RNA synthesis in a cage--structural studies of reovirus polymerase lambda3

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Biochemical characterization of a hepatitis C virus RNA-dependent RNA polymerase mutant lacking the C-terminal hydrophobic sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

WHAT IF: a molecular modeling and drug design program

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Non-nucleoside analogue inhibitors bind to an allosteric site on HCV NS5B polymerase. Crystal structures and mechanism of inhibition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Classical swine fever virus NS5B-GFP fusion protein possesses an RNA-dependent RNA polymerase activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

RNA-dependent RNA polymerase activity of the soluble recombinant hepatitis C virus NS5B protein truncated at the C-terminal region

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

RNA-dependent RNA polymerase activity encoded by GB virus-B non-structural protein 5B.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Enzymatic activity of poliovirus RNA polymerases with mutations at the tyrosine residue of the conserved YGDD motif: isolation and characterization of polioviruses containing RNA polymerases with FGDD and MGDD sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

Characterization of soluble hepatitis C virus RNA-dependent RNA polymerase expressed in Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

Interference with viral infection by defective RNA replicase

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

Initiation of minus-strand RNA synthesis by the brome mosaicvirus RNA-dependent RNA polymerase: use of oligoribonucleotide primers.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

Mutational analysis of bovine viral diarrhea virus RNA-dependent RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

Internal entry of ribosomes is directed by the 5' noncoding region of classical swine fever virus and is dependent on the presence of an RNA pseudoknot upstream of the initiation codon

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

Sequence and structural elements at the 3' terminus of bovine viral diarrhea virus genomic RNA: functional role during RNA replication

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments

1 reference

12 December 2020

PHD--an automatic mail server for protein secondary structure prediction

1 reference

12 December 2020

Roles of the host polypeptides in Q beta RNA replication. Host factor and ribosomal protein S1 allow initiation at reduced GTP concentration

1 reference

12 December 2020

Mutation of the aspartic acid residues of the GDD sequence motif of poliovirus RNA-dependent RNA polymerase results in enzymes with altered metal ion requirements for activity

1 reference

12 December 2020

Point mutations which drastically affect the polymerization activity of encephalomyocarditis virus RNA-dependent RNA polymerase correspond to the active site of Escherichia coli DNA polymerase I

1 reference

12 December 2020

Multiple sequence alignment with Clustal X

1 reference

12 December 2020

Biochemical properties of hepatitis C virus NS5B RNA-dependent RNA polymerase and identification of amino acid sequence motifs essential for enzymatic activity

1 reference

12 December 2020

Automated construction and graphical presentation of protein blocks from unaligned sequences

1 reference

12 December 2020

A time-efficient, linear-space local similarity algorithm

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2005.03.003

7 January 2021

10.1016/J.VIRUSRES.2005.03.003

Identifiers

DOI

1 reference

21 September 2017

1 reference