(Q40531505)

English

Neighbourhood of the central fold of the tRNA molecule bound to theE.coliribosome—affinity labeling studies with modified tRNAs carrying photoreactive probes attached to the dihydrouridine loop

scientific article published on February 25, 1991

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

Neighbourhood of the central fold of the tRNA molecule bound to theE.coliribosome—affinity labeling studies with modified tRNAs carrying photoreactive probes attached to the dihydrouridine loop (English)

reason for preferred rank

most precise value

1 reference

10.1093/NAR/19.4.801

https://api.crossref.org/works/10.1093/NAR/19.4.801

4 November 2022

Neighbourhood of the central fold of the tRNA molecule bound to the E. coli ribosome--affinity labeling studies with modified tRNAs carrying photoreactive probes attached to the dihydrouridine loop (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1708125

4 November 2022

Escherichia coli

0 references

1 reference

10.1093/NAR/19.4.801

https://api.crossref.org/works/10.1093/NAR/19.4.801

4 November 2022

Jan Podkowinski

1

object named as

J. Podkowinski

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1708125

4 November 2022

author name string

P. Gornicki

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1708125

4 November 2022

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1 reference

based on heuristic

inferred from title

publication date

1 February 1991

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

25 February 1991

1 reference

National Center for Biotechnology Information

PubMed publication ID

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=1708125

4 November 2022

full work available at URL

https://europepmc.org/articles/PMC333714

online access status

content deliverer

Europe PubMed Central

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1708125

4 November 2022

https://europepmc.org/articles/PMC333714?pdf=render

Portable Document Format

online access status

content deliverer

Europe PubMed Central

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1708125

4 November 2022

http://academic.oup.com/nar/article-pdf/19/4/801/3541866/19-4-801.pdf

Portable Document Format

1 reference

10.1093/NAR/19.4.801

https://api.crossref.org/works/10.1093/NAR/19.4.801

4 November 2022

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

19

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

4

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

801-808

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

Identification of a site on 23S ribosomal RNA located at the peptidyl transferase center

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Architecture of prokaryotic ribosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Structure and function of ribosomal RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

RNA-protein cross-linking in Escherichia coli 50S ribosomal subunits; determination of sites on 23S RNA that are cross-linked to proteins L2, L4, L24 and L27 by treatment with 2-iminothiolane

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Ribosomal proteins S7 and L1 are located close to the decoding site of E. coli ribosome--affinity labeling studies with modified tRNAs carrying photoreactive probes attached adjacent to the 3'-end of the anticodon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Labeling the peptidyltransferase center of the Escherichia coli ribosome with photoreactive tRNA(Phe) derivatives containing azidoadenosine at the 3' end of the acceptor arm: a model of the tRNA-ribosome complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Cross-linking of initiation factor IF3 to Escherichia coli 30S ribosomal subunit by trans-diamminedichloroplatinum(II): characterization of two cross-linking sites in 16S rRNA; a possible way of functioning for IF3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Selective isolation and detailed analysis of intra-RNA cross-links induced in the large ribosomal subunit of E. coli: a model for the tertiary structure of the tRNA binding domain in 23S RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Further refinement of the structure of yeast tRNAPhe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

22 September 2017

Photo-affinity labelling at the peptidyl transferase centre reveals two different positions for the A- and P-sites in domain V of 23S rRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

25 September 2017

The Escherichia coli 30S ribosomal subunit; an optimized three-dimensional fit between the ribosomal proteins and the 16S RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

25 September 2017

Identification of the site of cross-linking in 16S rRNA of an aromatic azide photoaffinity probe attached to the 5'-anticodon base of A site bound tRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

17 June 2018

Photochemical cross-linking of yeast tRNA(Phe) containing 8-azidoadenosine at positions 73 and 76 to the Escherichia coli ribosome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

17 June 2018

Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

17 June 2018

Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=333714

20 August 2018

Model for the three-dimensional folding of 16 S ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide residues of tRNA, directly interacting with proteins within the complex of the 30 S subunit of E. coli ribosome with poly(U) and NAcPhe-tRNA(Phe)

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a cross-link in the Escherichia coli ribosomal protein pair S13-S19 at the amino acid level

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crosslinking of phenylalanyl-tRNA to the ribosomal A site via a photoaffinity probe attached to the 4-thiouridine residue is exclusively to ribosomal protein S19

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High resolution localization of the tRNA anticodon interaction site on the Escherichia coli 30 S ribosomal subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct cross-links between initiation factors 1, 2, and 3 and ribosomal proteins promoted by 2-iminothiolane

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cross-linking of the anticodon of P and A site bound tRNAs to the ribosome via aromatic azides of variable length: involvement of 16S rRNA at the A site

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Parameters for the preparation of Escherichia coli ribosomes and ribosomal subunits active in tRNA binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The topographical localization of IF3 on Escherichia coli 30 S ribosomal subunits as a clue to its way of functioning

1 reference

https://pubmed.ncbi.nlm.nih.gov/1708125

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/19.4.801

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 September 2017

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