(Q40533143)

21 September 2017

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title

New programs for protein tertiary structure prediction (English)

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protein structure prediction

21 September 2017

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author

Jacquelyn S Fetrow

series ordinal

1

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21 September 2017

Bryant SH

2

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21 September 2017

1 April 1993

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21 September 2017

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21 September 2017

11

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21 September 2017

479-484

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21 September 2017

4

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One thousand families for the molecular biologist

21 September 2017

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Knowledge-based prediction of protein structures and the design of novel molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Comparative modeling of homologous proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Assessment of protein models with three-dimensional profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Statistical methods and insights for protein and DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

A new approach to protein fold recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Areas, volumes, packing and protein structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Characterization and cloning of fasciclin III: a glycoprotein expressed on a subset of neurons and axon pathways in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Fasciclin III: a novel homophilic adhesion molecule in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Molecular genetics of neuronal recognition in Drosophila: evolution and function of immunoglobulin superfamily cell adhesion molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Correctly folded proteins make twice as many hydrophobic contacts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

The dead-end elimination theorem and its use in protein side-chain positioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

Theory for protein mutability and biogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

An analysis of incorrectly folded protein models. Implications for structure predictions.

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Criteria that discriminate between native proteins and incorrectly folded models

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Solvation energy in protein folding and binding

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Polarity as a criterion in protein design

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Evaluation of protein models by atomic solvation preference.

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Protein model structure evaluation using the solvation free energy of folding

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Empirical solvation models can be used to differentiate native from near-native conformations of bovine pancreatic trypsin inhibitor

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Novel method for the rapid evaluation of packing in protein structures

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Identification of protein folds: matching hydrophobicity patterns of sequence sets with solvent accessibility patterns of known structures

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Secondary structure-based profiles: use of structure-conserving scoring tables in searching protein sequence databases for structural similarities

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Identification of native protein folds amongst a large number of incorrect models. The calculation of low energy conformations from potentials of mean force

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Contact potential that recognizes the correct folding of globular proteins

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Prediction of protein folding from amino acid sequence over discrete conformation spaces

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Topology fingerprint approach to the inverse protein folding problem

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

An empirical energy function for threading protein sequence through the folding motif

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Loops in globular proteins: a novel category of secondary structure

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Canonical structures for the hypervariable regions of immunoglobulins

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Analysis and prediction of the different types of beta-turn in proteins

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Taxonomy and conformational analysis of loops in proteins.

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Prediction of the folding of short polypeptide segments by uniform conformational sampling

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

An algorithm for determining the conformation of polypeptide segments in proteins by systematic search

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Predicting antibody hypervariable loop conformation. I. Ensembles of random conformations for ringlike structures

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Predicting antibody hypervariable loop conformations. II: Minimization and molecular dynamics studies of MCPC603 from many randomly generated loop conformations

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Prediction of protein side-chain conformation by packing optimization.

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors.

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Fast and simple Monte Carlo algorithm for side chain optimization in proteins: application to model building by homology

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

1 reference

https://api.crossref.org/works/10.1038%2FNBT0493-479

7 January 2021

Identifiers

DOI

10.1038/NBT0493-479

1 reference

21 September 2017

1 reference

PubMed ID

7763517