(Q40535883)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

review article

1 reference

title

The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

Jon R. Sayers

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

author name string

P A Williams

series ordinal

1

1 reference

21 September 2017

J R Sayers

series ordinal

2

1 reference

21 September 2017

language of work or name

English

0 references

publication date

1 December 1994

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

issue

3-4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

page(s)

195-217

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7765833%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/bf00696460

25 October 2019

exact match

0 references

cites work

Naturally occurring TOL plasmids in Pseudomonas strains carry either two homologous or two nonhomologous catechol 2,3-oxygenase genes.

1 reference

12 December 2020

Location and sequence of the todF gene encoding 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase in Pseudomonas putida F1

1 reference

12 December 2020

In vitro analysis of polypeptide requirements of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.

1 reference

12 December 2020

cis-diol dehydrogenases encoded by the TOL pWW0 plasmid xylL gene and the Acinetobacter calcoaceticus chromosomal benD gene are members of the short-chain alcohol dehydrogenase superfamily

1 reference

12 December 2020

Promoter-upstream activator sequences are required for expression of the xylS gene and upper-pathway operon on the Pseudomonas TOL plasmid

1 reference

12 December 2020

Plasmid gene organization: naphthalene/salicylate oxidation

1 reference

12 December 2020

Identification of a novel composite transposable element, Tn5280, carrying chlorobenzene dioxygenase genes of Pseudomonas sp. strain P51

1 reference

12 December 2020

Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates

1 reference

12 December 2020

Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102.

1 reference

12 December 2020

Cloning and nucleotide sequence of the 2,3-dihydroxybiphenyl dioxygenase gene from the PCB-degrading strain of Pseudomonas paucimobilis Q1.

1 reference

12 December 2020

Identical resolvases are encoded by Pseudomonas TOL plasmids pWW53 and pDK1.

1 reference

12 December 2020

Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.

1 reference

12 December 2020

Identification and characterization of Tn4653, a transposon covering the toluene transposon Tn4651 on TOL plasmid pWW0

1 reference

12 December 2020

Functional and evolutionary relationships among diverse oxygenases

1 reference

12 December 2020

Bacterial aromatic ring-cleavage enzymes are classified into two different gene families.

1 reference

12 December 2020

On the Evolution of Biochemical Syntheses

1 reference

12 December 2020

The metabolism of biphenyl byPseudomonas putida

1 reference

12 December 2020

Divergent evolution of chloroplast-type ferredoxins

1 reference

12 December 2020

Recombination of the bph (Biphenyl) Catabolic Genes from Plasmid pWW100 and Their Deletion during Growth on Benzoate

1 reference

12 December 2020

Nucleotide sequences of the meta-cleavage pathway enzymes 2-hydroxymuconic semialdehyde dehydrogenase and 2-hydroxymuconic semialdehyde hydrolase from Pseudomonas CF600.

1 reference

12 December 2020

Chromosomal location of TOL plasmid DNA in Pseudomonas putida

1 reference

12 December 2020

Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707

1 reference

12 December 2020

The XylS/AraC family of regulators.

1 reference

12 December 2020

Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multicomponent polychlorinated-biphenyl-degrading enzyme in Pseudomonas strain LB400

1 reference

12 December 2020

1 reference

12 December 2020

Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600

1 reference

12 December 2020

Genetic analysis of a transposon carrying toluene degrading genes on a TOL plasmid pWW0.

1 reference

12 December 2020

Metabolism of naphthalene by the biphenyl-degrading bacterium Pseudomonas paucimobilis Q1

1 reference

12 December 2020

Identification of a new gene, tmoF, in the Pseudomonas mendocina KR1 gene cluster encoding toluene-4-monooxygenase

1 reference

12 December 2020

Pseudomonas putida KF715 bphABCD operon encoding biphenyl and polychlorinated biphenyl degradation: cloning, analysis, and expression in soil bacteria

1 reference

12 December 2020

Nucleotide sequence of the regulatory gene xylR of the TOL plasmid from Pseudomonas putida.

1 reference

12 December 2020

Cloning and characterization of plasmid-encoded genes for the degradation of 1,2-dichloro-, 1,4-dichloro-, and 1,2,4-trichlorobenzene of Pseudomonas sp. strain P51

1 reference

12 December 2020

DNA sequence of the Acinetobacter calcoaceticus catechol 1,2-dioxygenase I structural gene catA: evidence for evolutionary divergence of intradiol dioxygenases by acquisition of DNA sequence repetitions

1 reference

12 December 2020

Excision and integration of degradative pathway genes from TOL plasmid pWW0.

1 reference

12 December 2020

Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydroxynaphthalene and subsequent reactions

1 reference

12 December 2020

The lower pathway operon for benzoate catabolism in biphenyl-utilizing Pseudomonas sp. strain IC and the nucleotide sequence of the bphE gene for catechol 2,3-dioxygenase

1 reference

12 December 2020

Characterization of five genes in the upper-pathway operon of TOL plasmid pWW0 from Pseudomonas putida and identification of the gene products

1 reference

12 December 2020

The methane monooxygenase gene cluster of Methylococcus capsulatus (Bath).

1 reference

12 December 2020

Primary structure of xylene monooxygenase: similarities to and differences from the alkane hydroxylation system

1 reference

12 December 2020

Genetic analysis of a Pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradation

1 reference

12 December 2020

Kinetic studies on benzyl alcohol dehydrogenase encoded by TOL plasmid pWWO. A member of the zinc-containing long chain alcohol dehydrogenase family.

1 reference

12 December 2020

Physical map of the aromatic amine and m-toluate catabolic plasmid pTDN1 in Pseudomonas putida: location of a unique meta-cleavage pathway

1 reference

12 December 2020

The meta cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes.

1 reference

12 December 2020

Complete nucleotide sequence of the metapyrocatechase gene on the TOI plasmid of Pseudomonas putida mt-2.

1 reference

12 December 2020

Nucleotide sequence of metapyrocatechase I (catechol 2,3-oxygenase I) gene mpcI from Alcaligenes eutrophus JMP222.

1 reference

12 December 2020

Repeated sequences including RS1100 from Pseudomonas cepacia AC1100 function as IS elements

1 reference

12 December 2020

The dehalogenase gene dehI from Pseudomonas putida PP3 is carried on an unusual mobile genetic element designated DEH

1 reference

12 December 2020

Molecular relationship of chromosomal genes encoding biphenyl/polychlorinated biphenyl catabolism: some soil bacteria possess a highly conserved bph operon

1 reference

12 December 2020

Nucleotide sequence of the 2,3-dihydroxybiphenyl dioxygenase gene of Pseudomonas pseudoalcaligenes

1 reference

12 December 2020

DNA sequence determination of the TOL plasmid (pWW0) xylGFJ genes of Pseudomonas putida: implications for the evolution of aromatic catabolism

1 reference

12 December 2020

TOL plasmid pWW15 contains two nonhomologous, independently regulated catechol 2,3-oxygenase genes

1 reference

12 December 2020

A comprehensive set of sequence analysis programs for the VAX

1 reference

12 December 2020

Identification of a catabolic transposon, Tn4371, carrying biphenyl and 4-chlorobiphenyl degradation genes in Alcaligenes eutrophus A5.

1 reference

12 December 2020

Nucleotide sequence of xylE from the TOL pDK1 plasmid and structural comparison with isofunctional catechol-2,3-dioxygenase genes from TOL, pWW0 and NAH7

1 reference

12 December 2020

Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWW0 plasmid xylXYZ, genes encoding benzoate dioxygenases

1 reference

12 December 2020

Genetic organization and regulation of a meta cleavage pathway for catechols produced from catabolism of toluene, benzene, phenol, and cresols by Pseudomonas pickettii PKO1

1 reference

12 December 2020

The presence of two complete homologous meta pathway operons on TOL plasmid pWW53.

1 reference

12 December 2020

Nucleotide sequencing and characterization of the genes encoding benzene oxidation enzymes of Pseudomonas putida

1 reference

12 December 2020

Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by Pseudomonas

1 reference

12 December 2020

Comparison of the nucleotide sequences of the meta-cleavage pathway genes of TOL plasmid pWW0 from Pseudomonas putida with other meta-cleavage genes suggests that both single and multiple nucleotide substitutions contribute to enzyme evolution

1 reference

12 December 2020

Three different 2,3-dihydroxybiphenyl-1,2-dioxygenase genes in the gram-positive polychlorobiphenyl-degrading bacterium Rhodococcus globerulus P6.

1 reference

12 December 2020

Nucleotide sequence and expression of gene nahH of plasmid NAH7 and homology with gene xylE of TOL pWWO.

1 reference

12 December 2020

Comparison of the meta pathway operons on NAH plasmid pWW60-22 and TOL plasmid pWW53-4 and its evolutionary significance

1 reference

12 December 2020

Naphthalene degrading genes on plasmid NAH7 are on a defective transposon

1 reference

12 December 2020

Identification of the nahR gene product and nucleotide sequences required for its activation of the sal operon

1 reference

12 December 2020

A comparison of the multiple alleles of xylS carried by TOL plasmids pWW53 and pDK1 and its implications for their evolutionary relationship

1 reference

12 December 2020

Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases

1 reference

12 December 2020

Sequences of genes encoding naphthalene dioxygenase in Pseudomonas putida strains G7 and NCIB 9816-4.

1 reference

12 December 2020

Activation of the Pseudomonas TOL plasmid upper pathway operon. Identification of binding sites for the positive regulator XylR and for integration host factor protein.

1 reference

12 December 2020

Regulation of naphthalene catabolic genes of plasmid NAH7.

1 reference

12 December 2020

Nucleotide sequence of the metapyrocatechase II (catechol 2,3-oxygenase II) gene mpcII from Alcaligenes eutrophus JMP 222.

1 reference

12 December 2020

CLUSTAL V: improved software for multiple sequence alignment

1 reference

12 December 2020

Chlorobenzoate catabolic transposon Tn5271 is a composite class I element with flanking class II insertion sequences

1 reference

12 December 2020

Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coli.

1 reference

12 December 2020

Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators

1 reference

12 December 2020

Overproduction of the xylS gene product and activation of the xylDLEGF operon on the TOL plasmid

1 reference

12 December 2020

Evolutionary relationships between catabolic pathways for aromatics: conservation of gene order and nucleotide sequences of catechol oxidation genes of pWW0 and NAH7 plasmids.

1 reference

12 December 2020

In vivo reactivation of catechol 2,3-dioxygenase mediated by a chloroplast-type ferredoxin: a bacterial strategy to expand the substrate specificity of aromatic degradative pathways

1 reference

12 December 2020

Metabolism of toluene and xylenes by Pseudomonas (putida (arvilla) mt-2: evidence for a new function of the TOL plasmid

1 reference

12 December 2020

The electron-transport proteins of hydroxylating bacterial dioxygenases

1 reference

12 December 2020

Apparent Fusion of the TOL Plasmid with the R91 Drug Resistance Plasmid in Pseudomonas aeruginosa

1 reference

12 December 2020

Isolation of TOL and RP4 recombinants by integrative suppression

1 reference

12 December 2020

Catabolism of pseudocumene and 3-ethyltoluene by Pseudomonas putida (arvilla) mt-2: evidence for new functions of the TOL (pWWO) plasmid

1 reference

12 December 2020

Cloning, nucleotide sequence and characterization of genes encoding naphthalene dioxygenase of Pseudomonas putida strain NCIB9816.

1 reference

12 December 2020

Characterization of the Pseudomonas sp. strain P51 gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory region

1 reference

12 December 2020

The TOL plasmids: determinants of the catabolism of toluene and the xylenes.

1 reference

12 December 2020

Molecular mechanisms of genetic adaptation to xenobiotic compounds

1 reference

12 December 2020

Oxidative degradation of aromatic hydrocarbons by microorganisms. I. Enzymatic formation of catechol from benzene

1 reference

12 December 2020