(Q40729799)

English

The core histone N-terminal tail domains negatively regulate binding of transcription factor IIIA to a nucleosome containing a 5S RNA gene via a novel mechanism

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scholarly article

1 reference

Europe PubMed Central

23 September 2017

The core histone N-terminal tail domains negatively regulate binding of transcription factor IIIA to a nucleosome containing a 5S RNA gene via a novel mechanism (English)

1 reference

Europe PubMed Central

23 September 2017

author name string

Zungyoon Yang

1

1 reference

Europe PubMed Central

23 September 2017

Chunyang Zheng

2

1 reference

Europe PubMed Central

23 September 2017

Christophe Thiriet

3

1 reference

Europe PubMed Central

23 September 2017

Jeffrey J Hayes

4

1 reference

Europe PubMed Central

23 September 2017

language of work or name

0 references

publication date

1 January 2005

1 reference

Europe PubMed Central

23 September 2017

Molecular and Cellular Biology

1 reference

Europe PubMed Central

23 September 2017

25

1 reference

Europe PubMed Central

23 September 2017

241-249

1 reference

Europe PubMed Central

23 September 2017

1

1 reference

Europe PubMed Central

23 September 2017

Structural features of transcription factor IIIA bound to a nucleosome in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

hSWI/SNF-catalyzed nucleosome sliding does not occur solely via a twist-diffusion mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Conformational dynamics of the chromatin fiber in solution: determinants, mechanisms, and functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Translating the Histone Code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Histone acetyltransferases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Human DNA ligase I efficiently seals nicks in nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

The H3-H4 N-terminal tail domains are the primary mediators of transcription factor IIIA access to 5S DNA within a nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

The language of covalent histone modifications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

In vitro reconstitution and analysis of mononucleosomes containing defined DNAs and proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Acetylation of histone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Role of the histone amino termini in facilitated binding of a transcription factor, GAL4-AH, to nucleosome cores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Participation of core histone "tails" in the stabilization of the chromatin solenoid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Transcription of class III genes: formation of preinitiation complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Mapping functional regions of transcription factor TFIIIA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

DNA and protein determinants of nucleosome positioning on sea urchin 5S rRNA gene sequences in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

The structure of DNA in a nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

High yield purification of active transcription factor IIIA expressed in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Histones H2A/H2B inhibit the interaction of transcription factor IIIA with the Xenopus borealis somatic 5S RNA gene in a nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Histone contributions to the structure of DNA in the nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Definition of the binding sites of individual zinc fingers in the transcription factor IIIA-5S RNA gene complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

A new procedure for purifying histone pairs H2A+H2B and H3+H4 from chromatin using hydroxylapatite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Transcriptionally active Xenopus laevis somatic 5 S ribosomal RNA genes are packaged with hyperacetylated histone H4, whereas transcriptionally silent oocyte genes are not.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Structural analysis of a triple complex between the histone octamer, a Xenopus gene for 5S RNA and transcription factor IIIA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

25 September 2017

Differential nucleosome positioning on Xenopus oocyte and somatic 5 S RNA genes determines both TFIIIA and H1 binding: a mechanism for selective H1 repression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

15 June 2018

Functionally relevant histone-DNA interactions extend beyond the classically defined nucleosome core region.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

15 June 2018

Binding of retinoic acid receptor heterodimers to DNA. A role for histones NH2 termini.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

15 June 2018

Developmental regulation of two 5S ribosomal RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

15 June 2018

Electrostatic mechanism of chromatin folding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

15 June 2018

Influence of chromatin folding on transcription initiation and elongation by RNA polymerase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

15 June 2018

Large scale preparation of nucleosomes containing site-specifically chemically modified histones lacking the core histone tail domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

19 August 2018

Nucleosome structural changes due to acetylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538782

19 August 2018

A positive role for histone acetylation in transcription factor access to nucleosomal DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription factor access to DNA in the nucleosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reversible oligonucleosome self-association: dependence on divalent cations and core histone tail domains

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Targeted cross-linking and DNA cleavage within model chromatin complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of core histone tail domains on the equilibrium constants for dynamic DNA site accessibility in nucleosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleosome sliding via TBP DNA binding in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A protein-protein interaction is essential for stable complex formation on a 5 S RNA gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the TFIIIA-5 S DNA complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of the histone "tails" in the folding of oligonucleosomes depleted of histone H1

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal Tail

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleosome sliding induced by the xMi-2 complex does not occur exclusively via a simple twist-diffusion mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/15601846

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.25.1.241-249.2005

1 reference

Europe PubMed Central

23 September 2017

1 reference

Europe PubMed Central

23 September 2017

1 reference

Europe PubMed Central

23 September 2017

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