(Q40808873)

23 September 2017

Multiscale analytic continuation approach to nanosystem simulation: applications to virus electrostatics (English)

1 reference

23 September 2017

Abhishek Singharoy

1

1 reference

23 September 2017

Anastasia M Yesnik

series ordinal

2

1 reference

23 September 2017

Peter Ortoleva

series ordinal

3

1 reference

23 September 2017

language of work or name

English

0 references

publication date

1 May 2010

1 reference

Journal of Chemical Physics

23 September 2017

1 reference

23 September 2017

132

1 reference

23 September 2017

17

1 reference

23 September 2017

174112

1 reference

Stochastic dynamics of bionanosystems: Multiscale analysis and specialized ensembles

23 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

The Poisson-Boltzmann model for tRNA: Assessment of the calculation set-up and ionic concentration cutoff

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Evaluation of ion binding to DNA duplexes using a size-modified Poisson-Boltzmann theory

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Electrostatic properties of cowpea chlorotic mottle virus and cucumber mosaic virus capsids

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Electrostatic correlations and fluctuations for ion binding to a finite length polyelectrolyte.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Triplex hydration: nanosecond molecular dynamics simulation of the solvated triplex formed by mixed sequences

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Importance of Vp1 calcium-binding residues in assembly, cell entry, and nuclear entry of simian virus 40.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Electrostatics of nanosystems: application to microtubules and the ribosome

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Biomolecular electrostatics with the linearized Poisson-Boltzmann equation

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

DNA bending by small, mobile multivalent cations

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

An analytical approach to computing biomolecular electrostatic potential. I. Derivation and analysis

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Viral structural transitions: an all-atom multiscale theory.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

All-atom multiscaling and new ensembles for dynamical nanoparticles.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Nanoparticle dynamics: a multiscale analysis of the Liouville equation.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Efficient solution technique for solving the Poisson-Boltzmann equation

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Hybrid boundary element and finite difference method for solving the nonlinear Poisson-Boltzmann equation.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Boundary element solution of the linear Poisson-Boltzmann equation and a multipole method for the rapid calculation of forces on macromolecules in solution.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2878355

Dynamical Friction. I. General Considerations: the Coefficient of Dynamical Friction

19 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1063%2F1.3424771

The distance fluctuation criterion for melting: Comparison of square-well and Morse potential models for clusters and homopolymers

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1063%2F1.3424771

QM/MM: what have we learned, where are we, and where do we go from here?

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1063%2F1.3424771

Electrostatic potential around charged finite rodlike macromolecules: nonlinear Poisson-Boltzmann theory

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20459161

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1063/1.3424771

1 reference

23 September 2017

1 reference

23 September 2017

PubMed publication ID

20459161

1 reference