(Q40952523)

25 September 2017

title

mRNA degradation and maturation in prokaryotes: the global players (English)

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25 September 2017

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Soumaya Laalami

1

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25 September 2017

Harald Putzer

series ordinal

2

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25 September 2017

publication date

1 December 2011

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25 September 2017

published in

Biomolecular concepts

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25 September 2017

volume

2

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25 September 2017

issue

6

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25 September 2017

page(s)

491-506

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Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported

25 September 2017

copyright license

start time

1 December 2011

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli

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Genetic studies of cleavage-initiated mRNA decay and processing of ribosomal 9S RNA show that the Escherichia coli ams and rne loci are the same

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Escherichia coli RNase E has a role in the decay of bacteriophage T4 mRNA.

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A conditional lethal mutation in an Escherichia coli strain with a longer chemical lifetime of messenger RNA

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Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12.

21 January 2018

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Oligoribonuclease is an essential component of the mRNA decay pathway

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An important role for RNase R in mRNA decay

21 January 2018

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RNA degradation in Escherichia coli regulated by 3' adenylation and 5' phosphorylation

21 January 2018

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Polyadenylylation destabilizes the rpsO mRNA of Escherichia coli

21 January 2018

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The poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R.

21 January 2018

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The phylogenetic distribution of bacterial ribonucleases.

21 January 2018

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Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E.

21 January 2018

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5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA

21 January 2018

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Structural insights into the dual activity of RNase J

21 January 2018

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RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis

21 January 2018

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Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing

21 January 2018

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Endonucleolytic initiation of mRNA decay in Escherichia coli

21 January 2018

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RNase G complementation of rne null mutation identifies functional interrelationships with RNase E in Escherichia coli

21 January 2018

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Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays

21 January 2018

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Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour.

21 January 2018

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Consequences of RNase E scarcity in Escherichia coli.

21 January 2018

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Euryarchaeal beta-CASP proteins with homology to bacterial RNase J Have 5'- to 3'-exoribonuclease activity.

21 January 2018

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Identification of an RNase J ortholog in Sulfolobus solfataricus: implications for 5'-to-3' directional decay and 5'-end protection of mRNA in Crenarchaeota

21 January 2018

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Translation initiation factor a/eIF2(-gamma) counteracts 5' to 3' mRNA decay in the archaeon Sulfolobus solfataricus

21 January 2018

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The complete genome of the crenarchaeon Sulfolobus solfataricus P2

21 January 2018

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Phosphodiesterase activity of CvfA is required for virulence in Staphylococcus aureus

21 January 2018

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Virulence gene regulation by CvfA, a putative RNase: the CvfA-enolase complex in Streptococcus pyogenes links nutritional stress, growth-phase control, and virulence gene expression

21 January 2018

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Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site.

21 January 2018

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Determination of the catalytic parameters of the N-terminal half of Escherichia coli ribonuclease E and the identification of critical functional groups in RNA substrates

21 January 2018

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Probing the substrate specificity of Escherichia coli RNase E using a novel oligonucleotide-based assay

21 January 2018

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Processing of the Bacillus subtilis thrS leader mRNA is RNase E-dependent in Escherichia coli.

21 January 2018

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Processing of Bacillus subtilis small cytoplasmic RNA: evidence for an additional endonuclease cleavage site

21 January 2018

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Recycling of a regulatory protein by degradation of the RNA to which it binds

21 January 2018

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RNase J1 endonuclease activity as a probe of RNA secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Role of Bacillus subtilis RNase J1 endonuclease and 5'-exonuclease activities in trp leader RNA turnover.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Molecular basis for the recognition and cleavage of RNA by the bifunctional 5'-3' exo/endoribonuclease RNase J

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.042

Unusual, dual endo- and exonuclease activity in the degradosome explained by crystal structure analysis of RNase J1

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.042

Initiation of decay of Bacillus subtilis rpsO mRNA by endoribonuclease RNase Y.

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.042

Ectopic RNase E sites promote bypass of 5'-end-dependent mRNA decay in Escherichia coli.

21 January 2018

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Role of RNA structure and susceptibility to RNase E in regulation of a cold shock mRNA, cspA mRNA.

21 January 2018

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Quaternary structure and biochemical properties of mycobacterial RNase E/G.

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.042

Characterization of Aquifex aeolicus RNase E/G.

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.042

The CafA protein required for the 5'-maturation of 16 S rRNA is a 5'-end-dependent ribonuclease that has context-dependent broad sequence specificity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Catalytic activation of multimeric RNase E and RNase G by 5'-monophosphorylated RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Ribonuclease E is a 5'-end-dependent endonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Cleavage of poly(A) tails on the 3'-end of RNA by ribonuclease E of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The catalytic domain of RNase E shows inherent 3' to 5' directionality in cleavage site selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Rapid cleavage of RNA by RNase E in the absence of 5' monophosphate stimulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

STAB-SD: a Shine-Dalgarno sequence in the 5' untranslated region is a determinant of mRNA stability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Induced mRNA stability in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Effect of translational signals on mRNA decay in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Killer and protective ribosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The Crystal Structure of the Escherichia coli RNase E Apoprotein and a Mechanism for RNA Degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Sensing of 5' monophosphate by Escherichia coli RNase G can significantly enhance association with RNA and stimulate the decay of functional mRNA transcripts in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Mechanism of mRNA destabilization by the glmS ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The HD domain defines a new superfamily of metal-dependent phosphohydrolases

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

KH domain: one motif, two folds

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Poly(A)-assisted RNA decay and modulators of RNA stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Participation of 3'-to-5' exoribonucleases in the turnover of Bacillus subtilis mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Messenger RNA decay and maturation in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Processing and stability of inducibly expressed rpsO mRNA derivatives in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Erythromycin-induced ribosome stalling and RNase J1-mediated mRNA processing in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Bacillus subtilis RNase J1 endonuclease and 5' exonuclease activities in the turnover of DeltaermC mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

A protein complex mediating mRNA degradation in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Proteins associated with RNase E in a multicomponent ribonucleolytic complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

A DEAD-box RNA helicase in the Escherichia coli RNA degradosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Function in Escherichia coli of the non-catalytic part of RNase E: role in the degradation of ribosome-free mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Global analysis of Escherichia coli RNA degradosome function using DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The RNase E of Escherichia coli has at least two binding sites for DEAD-box RNA helicases: functional replacement of RhlB by RhlE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Physical and functional interactions among RNase E, polynucleotide phosphorylase and the cold-shock protein, CsdA: evidence for a 'cold shock degradosome'.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Exoribonuclease R interacts with endoribonuclease E and an RNA helicase in the psychrotrophic bacterium Pseudomonas syringae Lz4W.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Elevation of RNase R in response to multiple stress conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

A Streptomyces coelicolor functional orthologue of Escherichia coli RNase E shows shuffling of catalytic and PNPase-binding domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

An mRNA degrading complex in Rhodobacter capsulatus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Autoregulation allows Escherichia coli RNase E to adjust continuously its synthesis to that of its substrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

Functional analysis of 11 putative essential genes in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.042

21 January 2018

Identifiers

DOI

10.1515/BMC.2011.042

1 reference

25 September 2017

1 reference