(Q41010701)

25 September 2017

MSCAN: identification of functional clusters of transcription factor binding sites (English)

1 reference

25 September 2017

4

1 reference

25 September 2017

2

Ojvind Johansson

1 reference

25 September 2017

Wynand B L Alkema

1

1 reference

PMCID

441525

25 September 2017

Jens Lagergren

series ordinal

3

1 reference

PMCID

441525

25 September 2017

language of work or name

1 reference

1 July 2004

1 reference

25 September 2017

Nucleic Acids Research

1 reference

25 September 2017

32

1 reference

25 September 2017

W195-8

1 reference

25 September 2017

Web Server issue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

25 September 2017

1 reference

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

Computational detection of cis -regulatory modules.

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

Cluster-Buster: Finding dense clusters of motifs in DNA sequences.

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

Target Explorer: An automated tool for the identification of new target genes for a specified set of transcription factors

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

TRANSFAC: transcriptional regulation, from patterns to profiles

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

The Bioperl toolkit: Perl modules for the life sciences

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

TFBS: Computational framework for transcription factor binding site analysis

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

SCORE: a computational approach to the identification of cis-regulatory modules and target genes in whole-genome sequence data. Site clustering over random expectation.

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

Searching for statistically significant regulatory modules.

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

Identification of functional clusters of transcription factor binding motifs in genome sequences: the MSCAN algorithm.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441525

19 August 2018

Identifiers

DOI

10.1093/NAR/GKH387

1 reference

25 September 2017

journals/nar/AlkemaJLW04

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 September 2017

1 reference

PMCID

441525